Regulog Lysine - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - Lysine
- By effector - Lysine
- By pathway - Lysine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Streptococcus pneumoniae TIGR4 | ||
| Streptococcus gallolyticus UCN34 | ||
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||
| Streptococcus suis 05ZYH33 | ||
| Lactococcus lactis subsp. lactis Il1403 | 2 | 2 |
| Lactococcus lactis subsp. cremoris SK11 | 2 | 2 |
| Streptococcus uberis 0140J | ||
| Streptococcus agalactiae 2603V/R | ||
| Streptococcus sanguinis SK36 | ||
| Streptococcus pyogenes M1 GAS | ||
| Streptococcus mutans UA159 | ||
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Streptococcus mitis B6 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| lysP |
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*2
Lactococcus lactis subsp. lactis Il1403 Site: position = -285 score = 97.97 sequence = ACATCGATAGAGGTC... Gene: L59950: Lysine-specific permease Gene: L169610: Lysine-specific permease |
*2
Lactococcus lactis subsp. cremoris SK11 Site: position = -338 score = 99.93 sequence = ACATCGATAGAGGTC... Gene: LACR_2505: Lysine-specific permease Gene: LACR_0412: Lysine-specific permease |
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Lysine-specific permease |
| CRON 2. | ||||||||||||||||
| dapA |
Gene: SP_1014: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: GALLO_1112: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: SSU05_0719: Dihydrodipicolinate synthase (EC 4.2.1.52) |
*
Lactococcus lactis subsp. lactis Il1403 Site: position = -277 score = 65.9 sequence = AAACAAAATTAGAGG... Gene: L0093: Dihydrodipicolinate synthase (EC 4.2.1.52) |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -277 score = 67.48 sequence = AAACAAAATTAGAGG... Gene: LACR_1729: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: SUB0938: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: SSA_1193: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: SMU.990: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: str1297: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Gene: SGO_1205: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: smi_1132: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Dihydrodipicolinate synthase (EC 4.2.1.52) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |