Regulog L19_leader - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | L19_leader |
| RFAM: | RF00556 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - L19_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Streptococcus pneumoniae TIGR4 | 1 | 1 |
| Streptococcus gallolyticus UCN34 | 1 | 1 |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 1 | 1 |
| Streptococcus suis 05ZYH33 | 1 | 1 |
| Lactococcus lactis subsp. lactis Il1403 | ||
| Lactococcus lactis subsp. cremoris SK11 | 1 | 1 |
| Streptococcus uberis 0140J | 1 | 1 |
| Streptococcus agalactiae 2603V/R | 1 | 1 |
| Streptococcus sanguinis SK36 | 1 | 1 |
| Streptococcus pyogenes M1 GAS | 1 | 1 |
| Streptococcus mutans UA159 | 1 | 1 |
| Streptococcus thermophilus CNRZ1066 | 1 | 1 |
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus equi subsp. zooepidemicus MGCS10565 | 1 | 1 |
| Streptococcus mitis B6 | 1 | 1 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| rplS |
*
Streptococcus pneumoniae TIGR4 Site: position = -54 score = 34.32 sequence = ACAGTTTATCCGCTG... Gene: SP_1293: LSU ribosomal protein L19p |
*
Streptococcus gallolyticus UCN34 Site: position = -55 score = 21.07 sequence = ACGGCTAATCCGCTG... Gene: GALLO_1479: LSU ribosomal protein L19p |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -51 score = 26.39 sequence = GGCTAATCCGCTAAG... Gene: SDEG_0696: LSU ribosomal protein L19p |
*
Streptococcus suis 05ZYH33 Site: position = -54 score = 23.61 sequence = AGTTTATCCGCTGGG... Gene: SSU05_0352: LSU ribosomal protein L19p |
Gene: L0415: LSU ribosomal protein L19p |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -60 score = 18.3 sequence = TGTTCATCCGCTGAG... Gene: LACR_0945: LSU ribosomal protein L19p |
*
Streptococcus uberis 0140J Site: position = -52 score = 24.29 sequence = GGCTAATCCGCTGGG... Gene: SUB0644: LSU ribosomal protein L19p |
*
Streptococcus agalactiae 2603V/R Site: position = -52 score = 28.81 sequence = GGCTAATCCGCTGAG... Gene: SAG0544: LSU ribosomal protein L19p |
*
Streptococcus sanguinis SK36 Site: position = -20 score = 25.38 sequence = ACGACTAATCCGCTG... Gene: SSA_1265: LSU ribosomal protein L19p |
*
Streptococcus pyogenes M1 GAS Site: position = -51 score = 26.39 sequence = GGCTAATCCGCTAAG... Gene: SPy0724: LSU ribosomal protein L19p |
*
Streptococcus mutans UA159 Site: position = -56 score = 28.78 sequence = ACGGCTAATCCGCTG... Gene: SMU.1288: LSU ribosomal protein L19p |
*
Streptococcus thermophilus CNRZ1066 Site: position = -62 score = 28.23 sequence = ACGGCTAATCCGCTG... Gene: str1179: LSU ribosomal protein L19p |
Gene: SGO_1383: LSU ribosomal protein L19p |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -53 score = 24.29 sequence = GGCTAATCCGCTAAG... Gene: Sez_0754: LSU ribosomal protein L19p |
*
Streptococcus mitis B6 Site: position = -54 score = 29.96 sequence = ACAGTTTATCCGCTG... Gene: smi_1265: LSU ribosomal protein L19p |
LSU ribosomal protein L19p |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |