Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog L13_leader - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: L13_leader
RFAM: RF00555
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 2 1
Streptococcus gallolyticus UCN34 2 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 2 1
Streptococcus suis 05ZYH33 2 1
Lactococcus lactis subsp. lactis Il1403 2 1
Lactococcus lactis subsp. cremoris SK11 2 1
Streptococcus uberis 0140J 2 1
Streptococcus agalactiae 2603V/R 2 1
Streptococcus sanguinis SK36 2 1
Streptococcus pyogenes M1 GAS 2 1
Streptococcus mutans UA159 2 1
Streptococcus thermophilus CNRZ1066 2 1
Streptococcus gordonii str. Challis substr. CH1 2 1
Streptococcus equi subsp. zooepidemicus MGCS10565 2 1
Streptococcus mitis B6 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplM
*
Streptococcus pneumoniae TIGR4

Site:
position = -106
score = 56.01
sequence = GTATTGTTTACCCCA...

Gene: SP_0294: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus gallolyticus UCN34

Site:
position = -102
score = 54.93
sequence = GTATTGTTTACCCCA...

Gene: GALLO_0233: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -3
score = 53.92
sequence = GTATTGTTTACCCCA...

Gene: SDEG_0277: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus suis 05ZYH33

Site:
position = -100
score = 54.13
sequence = TGGTATTGTTTACCC...

Gene: SSU05_1898: LSU ribosomal protein L13p (L13Ae)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -103
score = 52.52
sequence = CGGTATTGTTTACCC...

Gene: L0409: LSU ribosomal protein L13p (L13Ae)
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -103
score = 52.52
sequence = CGGTATTGTTTACCC...

Gene: LACR_2584: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus uberis 0140J

Site:
position = -111
score = 53.64
sequence = GTATTGTTTACCCCA...

Gene: SUB0276: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus agalactiae 2603V/R

Site:
position = -102
score = 57.37
sequence = GTATTGTTTACCCCA...

Gene: SAG0214: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus sanguinis SK36

Site:
position = -101
score = 55.83
sequence = CGGTATTGTTTACCC...

Gene: SSA_2034: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus pyogenes M1 GAS

Site:
position = -110
score = 54.17
sequence = CGGTATTGTTTACCC...

Gene: SPy1932: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus mutans UA159

Site:
position = -98
score = 55.8
sequence = GTATTGTTTGCCCCA...

Gene: SMU.169: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus thermophilus CNRZ1066

Site:
position = -109
score = 56.41
sequence = GTATTGTTTACCCCA...

Gene: str0093: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -101
score = 56.45
sequence = GTATTGTTTACCCCA...

Gene: SGO_0358: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -126
score = 55.27
sequence = CGGTATTGTTTACCC...

Gene: Sez_1746: LSU ribosomal protein L13p (L13Ae)
*
Streptococcus mitis B6

Site:
position = -108
score = 56.01
sequence = CGGTATTGTTTACCC...

Gene: smi_1797: LSU ribosomal protein L13p (L13Ae)
LSU ribosomal protein L13p (L13Ae)
rpsI
 
Streptococcus pneumoniae TIGR4

Gene: SP_0295: SSU ribosomal protein S9p (S16e)
 
Streptococcus gallolyticus UCN34

Gene: GALLO_0234: SSU ribosomal protein S9p (S16e)
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_0278: SSU ribosomal protein S9p (S16e)
 
Streptococcus suis 05ZYH33

Gene: SSU05_1897: SSU ribosomal protein S9p (S16e)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0386: SSU ribosomal protein S9p (S16e)
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_2583: SSU ribosomal protein S9p (S16e)
 
Streptococcus uberis 0140J

Gene: SUB0277: SSU ribosomal protein S9p (S16e)
 
Streptococcus agalactiae 2603V/R

Gene: SAG0215: SSU ribosomal protein S9p (S16e)
 
Streptococcus sanguinis SK36

Gene: SSA_2033: SSU ribosomal protein S9p (S16e)
 
Streptococcus pyogenes M1 GAS

Gene: SPy1931: SSU ribosomal protein S9p (S16e)
 
Streptococcus mutans UA159

Gene: SMU.170: SSU ribosomal protein S9p (S16e)
 
Streptococcus thermophilus CNRZ1066

Gene: str0094: SSU ribosomal protein S9p (S16e)
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_0359: SSU ribosomal protein S9p (S16e)
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_1745: SSU ribosomal protein S9p (S16e)
 
Streptococcus mitis B6

Gene: smi_1796: SSU ribosomal protein S9p (S16e)
SSU ribosomal protein S9p (S16e)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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