Regulog L10_leader - Streptococcaceae

Properties
Regulator type:	RNA regulatory element
Name:	L10_leader
RFAM:	RF00557
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Streptococcaceae
By RNA motif - L10_leader
By pathway - Ribosome biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Streptococcus pneumoniae TIGR4	2	1
Streptococcus gallolyticus UCN34	2	1
Streptococcus dysgalactiae subsp. equisimilis GGS_124	2	1
Streptococcus suis 05ZYH33	2	1
Lactococcus lactis subsp. lactis Il1403	2	1
Lactococcus lactis subsp. cremoris SK11	2	1
Streptococcus uberis 0140J	2	1
Streptococcus agalactiae 2603V/R	2	1
Streptococcus sanguinis SK36	2	1
Streptococcus pyogenes M1 GAS	2	1
Streptococcus mutans UA159	2	1
Streptococcus thermophilus CNRZ1066	2	1
Streptococcus gordonii str. Challis substr. CH1	2	1
Streptococcus equi subsp. zooepidemicus MGCS10565	2	1
Streptococcus mitis B6	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
rplJ	* Streptococcus pneumoniae TIGR4 Site: position = -175 score = 80.02 sequence = ATACGGTTTAAAAAA... Gene: SP_1355: LSU ribosomal protein L10p (P0)	* Streptococcus gallolyticus UCN34 Site: position = -165 score = 77.97 sequence = GGTTTTGTAATGAAA... Gene: GALLO_1248: LSU ribosomal protein L10p (P0)	* Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -113 score = 76.56 sequence = GGTTTGATAAAAACT... Gene: SDEG_0853: LSU ribosomal protein L10p (P0)	* Streptococcus suis 05ZYH33 Site: position = -126 score = 74.51 sequence = GGAGGTTTGAAAAAA... Gene: SSU05_0984: LSU ribosomal protein L10p (P0)	* Lactococcus lactis subsp. lactis Il1403 Site: position = -152 score = 81.4 sequence = ACGGTTCTAAAAGAA... Gene: L0407: LSU ribosomal protein L10p (P0)	* Lactococcus lactis subsp. cremoris SK11 Site: position = -152 score = 81.82 sequence = ACGGTTCTAAAAGAA... Gene: LACR_1387: LSU ribosomal protein L10p (P0)	* Streptococcus uberis 0140J Site: position = -162 score = 80.75 sequence = GTTTTGAAAAAAACT... Gene: SUB0777: LSU ribosomal protein L10p (P0)	* Streptococcus agalactiae 2603V/R Site: position = -164 score = 78.5 sequence = AAGTTTCTGATGAAA... Gene: SAG1302: LSU ribosomal protein L10p (P0)	* Streptococcus sanguinis SK36 Site: position = -172 score = 79.02 sequence = ATGGTTTGAAAAAAC... Gene: SSA_1104: LSU ribosomal protein L10p (P0)	* Streptococcus pyogenes M1 GAS Site: position = -164 score = 81.84 sequence = TTTTGATAAAAAACT... Gene: SPy1072: LSU ribosomal protein L10p (P0)	* Streptococcus mutans UA159 Site: position = -162 score = 77.58 sequence = AGGTTTTGAAAAACT... Gene: SMU.957: LSU ribosomal protein L10p (P0)	* Streptococcus thermophilus CNRZ1066 Site: position = -167 score = 74.97 sequence = GGTTTGAAAAAAACT... Gene: str0536: LSU ribosomal protein L10p (P0)	* Streptococcus gordonii str. Challis substr. CH1 Site: position = -175 score = 79.92 sequence = CAATGGTTTGAAAAA... Gene: SGO_1192: LSU ribosomal protein L10p (P0)	* Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -165 score = 78.89 sequence = TGGTTTTAAATAAAA... Gene: Sez_1205: LSU ribosomal protein L10p (P0)	* Streptococcus mitis B6 Site: position = -173 score = 77.0 sequence = ACGGTTTGAAAAAAC... Gene: smi_0783: LSU ribosomal protein L10p (P0)	LSU ribosomal protein L10p (P0)
rplL	Streptococcus pneumoniae TIGR4 Gene: SP_1354: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus gallolyticus UCN34 Gene: GALLO_1247: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus dysgalactiae subsp. equisimilis GGS_124 Gene: SDEG_0855: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus suis 05ZYH33 Gene: SSU05_0983: LSU ribosomal protein L7/L12 (P1/P2)	Lactococcus lactis subsp. lactis Il1403 Gene: L0405: LSU ribosomal protein L7/L12 (P1/P2)	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1386: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus uberis 0140J Gene: SUB0778: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus agalactiae 2603V/R Gene: SAG1301: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus sanguinis SK36 Gene: SSA_1105: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus pyogenes M1 GAS Gene: SPy1073: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus mutans UA159 Gene: SMU.960: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus thermophilus CNRZ1066 Gene: str0537: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus gordonii str. Challis substr. CH1 Gene: SGO_1191: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_1204: LSU ribosomal protein L7/L12 (P1/P2)	Streptococcus mitis B6 Gene: smi_0784: LSU ribosomal protein L7/L12 (P1/P2)	LSU ribosomal protein L7/L12 (P1/P2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog L10_leader - Streptococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --