Regulog T-box(Val) - Bacillales
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Val-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Bacillales
- By RNA motif - T-box
- By effector - Val-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 1 | 1 |
| Bacillus amyloliquefaciens FZB42 | 1 | 1 |
| Bacillus pumilus SAFR-032 | 1 | 1 |
| Bacillus licheniformis DSM 13 | 1 | 1 |
| Anoxybacillus flavithermus WK1 | 1 | 1 |
| Geobacillus kaustophilus HTA426 | 1 | 1 |
| Bacillus cereus ATCC 14579 | 1 | 1 |
| Bacillus halodurans C-125 | 1 | 1 |
| Bacillus clausii KSM-K16 | 1 | 1 |
| Oceanobacillus iheyensis HTE831 | 1 | 1 |
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| valS |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -283 score = 126.09 sequence = TACACCTGCTTAGAA... Gene: BSU28090: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -281 score = 117.56 sequence = TACACCTGCTTTGAA... Gene: RBAM_025140: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Bacillus pumilus SAFR-032 Site: position = -290 score = 112.19 sequence = ATCATAAGCGTGGAT... Gene: BPUM_2449: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Bacillus licheniformis DSM 13 Site: position = -295 score = 123.49 sequence = ATCACCCGCTTTGAA... Gene: BLi02938: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Anoxybacillus flavithermus WK1 Site: position = -258 score = 129.25 sequence = AAAAAGCGAAGATAG... Gene: Aflv_0614: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Geobacillus kaustophilus HTA426 Site: position = -337 score = 116.83 sequence = GACAAAAGCGAAGAC... Gene: GK2638: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Bacillus cereus ATCC 14579 Site: position = -270 score = 135.53 sequence = TATAAATGCCTTGAA... Gene: BC4465: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Bacillus halodurans C-125 Site: position = -287 score = 121.2 sequence = GTTAAATGCACAGAT... Gene: BH3038: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Bacillus clausii KSM-K16 Site: position = -265 score = 128.1 sequence = ATAAAAAGCGATGAG... Gene: ABC2621: Valyl-tRNA synthetase (EC 6.1.1.9) |
*
Oceanobacillus iheyensis HTE831 Site: position = -277 score = 115.75 sequence = AATAAATGCGAAGAT... Gene: OB2061: Valyl-tRNA synthetase (EC 6.1.1.9) |
Gene: Pjdr2_4429: Valyl-tRNA synthetase (EC 6.1.1.9) |
Valyl-tRNA synthetase (EC 6.1.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |