Regulog T-box(Trp) - Staphylococcaceae

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Trp-tRNA
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - T-box
By effector - Trp-tRNA
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Staphylococcus aureus subsp. aureus N315	7	1
Staphylococcus capitis SK14	7	1
Staphylococcus epidermidis ATCC 12228	7	1
Staphylococcus carnosus subsp. carnosus TM300	7	1
Staphylococcus haemolyticus JCSC1435	7	1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	7	1
Macrococcus caseolyticus JCSC5402

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes								Function

CRON 1.
trpE	* Staphylococcus aureus subsp. aureus N315 Site: position = -432 score = 70.61 sequence = AGAATTTTCTAAAGA... Site: position = -228 score = 66.62 sequence = TTTAGACAAAATGTA... Gene: SA1199: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa	* Staphylococcus capitis SK14 Site: position = -419 score = 63.55 sequence = TAATTTGAATGAATA... Site: position = -220 score = 62.59 sequence = TTTAAGCAAAATGTA... Gene: STACA0001_1613: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa	* Staphylococcus epidermidis ATCC 12228 Site: position = -412 score = 62.24 sequence = TAATTTGATTGATAG... Site: position = -220 score = 66.05 sequence = TTGAAGCAAAGTGAA... Gene: SE1048: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa	* Staphylococcus carnosus subsp. carnosus TM300 Site: position = -227 score = 74.73 sequence = ATGAGATAAAATGAA... Gene: Sca_1012: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa	* Staphylococcus haemolyticus JCSC1435 Site: position = -233 score = 63.65 sequence = TAAATAGGCATAAAT... Site: position = -446 score = 62.95 sequence = AAACAATTCTATGAA... Gene: SH1542: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa	* Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -233 score = 70.63 sequence = TTAGAAAACAAAATG... Gene: SSP1379: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa	Macrococcus caseolyticus JCSC5402	Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
trpG	Staphylococcus aureus subsp. aureus N315 Gene: SA1200: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb	Staphylococcus capitis SK14 Gene: STACA0001_1614: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb	Staphylococcus epidermidis ATCC 12228 Gene: SE1049: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_1013: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb	Staphylococcus haemolyticus JCSC1435 Gene: SH1541: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP1378: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb	Macrococcus caseolyticus JCSC5402	Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
trpD	Staphylococcus aureus subsp. aureus N315 Gene: SA1201: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Staphylococcus capitis SK14 Gene: STACA0001_1615: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Staphylococcus epidermidis ATCC 12228 Gene: SE1050: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_1014: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Staphylococcus haemolyticus JCSC1435 Gene: SH1540: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP1377: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Macrococcus caseolyticus JCSC5402	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
trpC	Staphylococcus aureus subsp. aureus N315 Gene: SA1202: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Staphylococcus capitis SK14 Gene: STACA0001_1616: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Staphylococcus epidermidis ATCC 12228 Gene: SE1051: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_1015: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Staphylococcus haemolyticus JCSC1435 Gene: SH1539: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP1376: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Macrococcus caseolyticus JCSC5402	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
trpF	Staphylococcus aureus subsp. aureus N315 Gene: SA1203: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Staphylococcus capitis SK14 Gene: STACA0001_1617: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Staphylococcus epidermidis ATCC 12228 Gene: SE1052: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_1016: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Staphylococcus haemolyticus JCSC1435 Gene: SH1538: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP1375: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Macrococcus caseolyticus JCSC5402	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
trpB	Staphylococcus aureus subsp. aureus N315 Gene: SA1204: Tryptophan synthase beta chain (EC 4.2.1.20)	Staphylococcus capitis SK14 Gene: STACA0001_1618: Tryptophan synthase beta chain (EC 4.2.1.20)	Staphylococcus epidermidis ATCC 12228 Gene: SE1053: Tryptophan synthase beta chain (EC 4.2.1.20)	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_1017: Tryptophan synthase beta chain (EC 4.2.1.20)	Staphylococcus haemolyticus JCSC1435 Gene: SH1537: Tryptophan synthase beta chain (EC 4.2.1.20)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP1374: Tryptophan synthase beta chain (EC 4.2.1.20)	Macrococcus caseolyticus JCSC5402	Tryptophan synthase beta chain (EC 4.2.1.20)
trpA	Staphylococcus aureus subsp. aureus N315 Gene: SA1205: Tryptophan synthase alpha chain (EC 4.2.1.20)	Staphylococcus capitis SK14 Gene: STACA0001_1619: Tryptophan synthase alpha chain (EC 4.2.1.20)	Staphylococcus epidermidis ATCC 12228 Gene: SE1054: Tryptophan synthase alpha chain (EC 4.2.1.20)	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_1018: Tryptophan synthase alpha chain (EC 4.2.1.20)	Staphylococcus haemolyticus JCSC1435 Gene: SH1536: Tryptophan synthase alpha chain (EC 4.2.1.20)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP1373: Tryptophan synthase alpha chain (EC 4.2.1.20)	Macrococcus caseolyticus JCSC5402	Tryptophan synthase alpha chain (EC 4.2.1.20)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog T-box(Trp) - Staphylococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --