Regulog T-box(Thr) - Staphylococcaceae

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Thr-tRNA
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - T-box
By effector - Thr-tRNA
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Staphylococcus aureus subsp. aureus N315	1	1
Staphylococcus capitis SK14	1	1
Staphylococcus epidermidis ATCC 12228	1	1
Staphylococcus carnosus subsp. carnosus TM300	2	2
Staphylococcus haemolyticus JCSC1435	2	2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	1	1
Macrococcus caseolyticus JCSC5402	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes								Function

CRON 1.
thrS	* Staphylococcus aureus subsp. aureus N315 Site: position = -375 score = 92.1 sequence = AATCGTTTAAATGAT... Gene: SA1506: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Staphylococcus capitis SK14 Site: position = -301 score = 86.47 sequence = AACTATTGAAGATAA... Gene: STACA0001_2343: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Staphylococcus epidermidis ATCC 12228 Site: position = -312 score = 74.64 sequence = CGTTGAAACTATTGA... Gene: SE1357: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Staphylococcus carnosus subsp. carnosus TM300 Site: position = -277 score = 83.11 sequence = TAAAAAATCGAGGAT... Gene: Sca_1289: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Staphylococcus haemolyticus JCSC1435 Site: position = -275 score = 92.54 sequence = AATAGTTGAAGATAT... Gene: SH1242: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -303 score = 97.02 sequence = ATAATACGGAGACAA... Gene: SSP1082: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Macrococcus caseolyticus JCSC5402 Site: position = -250 score = 93.7 sequence = TATGAATAACATCAT... Gene: MCCL_1347: Threonyl-tRNA synthetase (EC 6.1.1.3)	Threonyl-tRNA synthetase (EC 6.1.1.3)

CRON 2.
thrZ	Staphylococcus aureus subsp. aureus N315	Staphylococcus capitis SK14	Staphylococcus epidermidis ATCC 12228	* Staphylococcus carnosus subsp. carnosus TM300 Site: position = -322 score = 41.67 sequence = TTGATTCGGTGATAA... Gene: Sca_0282: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Staphylococcus haemolyticus JCSC1435 Site: position = -266 score = 77.55 sequence = ATTAATACATGATTG... Gene: SH0134: Threonyl-tRNA synthetase (EC 6.1.1.3)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	Macrococcus caseolyticus JCSC5402	Threonyl-tRNA synthetase (EC 6.1.1.3)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog T-box(Thr) - Staphylococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --