Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog T-box(Ser) - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ser-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 1 1
Staphylococcus capitis SK14 1 1
Staphylococcus epidermidis ATCC 12228 1 1
Staphylococcus carnosus subsp. carnosus TM300 1 1
Staphylococcus haemolyticus JCSC1435 1 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 1 1
Macrococcus caseolyticus JCSC5402 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
serS
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -299
score = 97.15
sequence = TTGTTCGTAGGACAA...

Gene: SA0009: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Staphylococcus capitis SK14

Site:
position = -294
score = 89.68
sequence = CATTGTTCGTAGGCT...

Gene: STACA0001_1367: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -295
score = 85.69
sequence = TTGTTCGTAGGACAA...

Gene: SE0007: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -292
score = 93.7
sequence = CATTGTTCGCAGGAC...

Gene: Sca_2465: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -282
score = 88.78
sequence = TGTTCGTGGGACAAG...

Gene: SH0008: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -251
score = 99.02
sequence = TTGTTCGTAGGATAA...

Gene: SSP0009: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -246
score = 104.34
sequence = TTATTTGTCTGATTG...

Gene: MCCL_0013: Seryl-tRNA synthetase (EC 6.1.1.11)
Seryl-tRNA synthetase (EC 6.1.1.11)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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