Regulog T-box(Met) - Bacillales

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Met-tRNA
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - T-box
By effector - Met-tRNA
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032	4	1
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579	1	1
Bacillus halodurans C-125	1	1
Bacillus clausii KSM-K16	1	1
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
metS	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU00380: Methionyl-tRNA synthetase (EC 6.1.1.10)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_000470: Methionyl-tRNA synthetase (EC 6.1.1.10)	Bacillus pumilus SAFR-032 Gene: BPUM_0022: Methionyl-tRNA synthetase (EC 6.1.1.10)	Bacillus licheniformis DSM 13 Gene: BLi00051: Methionyl-tRNA synthetase (EC 6.1.1.10)	Anoxybacillus flavithermus WK1 Gene: Aflv_0032: Methionyl-tRNA synthetase (EC 6.1.1.10)	Geobacillus kaustophilus HTA426 Gene: GK0031: Methionyl-tRNA synthetase (EC 6.1.1.10)	2 Bacillus cereus ATCC 14579* Gene: BC0043: Methionyl-tRNA synthetase (EC 6.1.1.10) Site: position = -322 score = 111.57 sequence = CGTAAAAGCGTTGAA... Gene: BC5031: Methionyl-tRNA synthetase (EC 6.1.1.10)	* Bacillus halodurans C-125 Site: position = -346 score = 73.43 sequence = GAGTCCTGATGAAGG... Gene: BH0053: Methionyl-tRNA synthetase (EC 6.1.1.10)	* Bacillus clausii KSM-K16 Site: position = -265 score = 68.42 sequence = GAATGTCTATGAACG... Gene: ABC0061: Methionyl-tRNA synthetase (EC 6.1.1.10)	Oceanobacillus iheyensis HTE831 Gene: OB0046: Methionyl-tRNA synthetase (EC 6.1.1.10)	2 Paenibacillus sp. JDR-2* Site: position = -331 score = 75.43 sequence = CATATTCGATGAACG... Gene: Pjdr2_2273: Methionyl-tRNA synthetase (EC 6.1.1.10) Site: position = -314 score = 95.53 sequence = TAATGGCAACGAAGA... Gene: Pjdr2_3139: Methionyl-tRNA synthetase (EC 6.1.1.10)	Methionyl-tRNA synthetase (EC 6.1.1.10)

CRON 2.
BPUM_3680	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	* Bacillus pumilus SAFR-032 Site: position = -382 score = 110.2 sequence = TAAACAGGCAATGAC... Gene: BPUM_3680: Hypothetical protein	Bacillus licheniformis DSM 13 Gene: BLi04329: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB1067: Hypothetical protein	Paenibacillus sp. JDR-2	Hypothetical protein
mtsA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3679: Substrate-specific component MtsA of methionine-regulated ECF transporter	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC2654: Substrate-specific component MtsA of methionine-regulated ECF transporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Substrate-specific component MtsA of methionine-regulated ECF transporter
mtsB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3678: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC2655: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
mtsC	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3677: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC2656: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog T-box(Met) - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --