Regulog T-box(Ile) - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ile-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - T-box
- By effector - Ile-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 1 | 1 |
| Staphylococcus capitis SK14 | 1 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 1 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 1 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 1 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 1 | 1 |
| Macrococcus caseolyticus JCSC5402 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| ileS |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -214 score = 80.94 sequence = AATAAAGACAGACGC... Gene: SA1036: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Staphylococcus capitis SK14 Site: position = -213 score = 82.24 sequence = TAAAAAGACAGACGC... Gene: STACA0001_2189: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -218 score = 72.53 sequence = TATAAAGACAGACGC... Gene: SE0868: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -225 score = 68.04 sequence = CACAGAGACAGACGC... Gene: Sca_0806: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -218 score = 86.22 sequence = TAAAATAAGTCAGAC... Gene: SH1722: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -246 score = 52.99 sequence = ATAAGGATAACAGAC... Gene: SSP1578: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Macrococcus caseolyticus JCSC5402 Site: position = -207 score = 50.36 sequence = TATATGTAGAACCGG... Gene: MCCL_0764: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |