Regulog T-box(Gly) - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Gly-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - T-box
- By effector - Gly-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 1 | 1 |
| Staphylococcus capitis SK14 | 1 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 1 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 1 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 1 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 1 | 1 |
| Macrococcus caseolyticus JCSC5402 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| glyS |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -162 score = 12.87 sequence = AAAGCGAGTGACTAC... Gene: SA1394: Glycyl-tRNA synthetase (EC 6.1.1.14) |
*
Staphylococcus capitis SK14 Site: position = -264 score = 13.85 sequence = TTTCAATTAGAATAA... Gene: STACA0001_1907: Glycyl-tRNA synthetase (EC 6.1.1.14) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -165 score = 13.08 sequence = AAAGCGAGTGTTTAC... Gene: SE1252: Glycyl-tRNA synthetase (EC 6.1.1.14) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -151 score = 20.72 sequence = TAATAATTTAAGCGA... Gene: Sca_1187: Glycyl-tRNA synthetase (EC 6.1.1.14) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -184 score = 12.96 sequence = ATTAAAACTTTATAA... Gene: SH1351: Glycyl-tRNA synthetase (EC 6.1.1.14) |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -181 score = 12.53 sequence = AGTTAAAAGCGAGTG... Gene: SSP1191: Glycyl-tRNA synthetase (EC 6.1.1.14) |
*
Macrococcus caseolyticus JCSC5402 Site: position = -115 score = 29.01 sequence = TTTATAAAAGTGAGT... Gene: MCCL_1217: Glycyl-tRNA synthetase (EC 6.1.1.14) |
Glycyl-tRNA synthetase (EC 6.1.1.14) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |