Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog T-box(Gly) - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Gly-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 1 1
Staphylococcus capitis SK14 1 1
Staphylococcus epidermidis ATCC 12228 1 1
Staphylococcus carnosus subsp. carnosus TM300 1 1
Staphylococcus haemolyticus JCSC1435 1 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 1 1
Macrococcus caseolyticus JCSC5402 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glyS
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -162
score = 12.87
sequence = AAAGCGAGTGACTAC...

Gene: SA1394: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Staphylococcus capitis SK14

Site:
position = -264
score = 13.85
sequence = TTTCAATTAGAATAA...

Gene: STACA0001_1907: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -165
score = 13.08
sequence = AAAGCGAGTGTTTAC...

Gene: SE1252: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -151
score = 20.72
sequence = TAATAATTTAAGCGA...

Gene: Sca_1187: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -184
score = 12.96
sequence = ATTAAAACTTTATAA...

Gene: SH1351: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -181
score = 12.53
sequence = AGTTAAAAGCGAGTG...

Gene: SSP1191: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -115
score = 29.01
sequence = TTTATAAAAGTGAGT...

Gene: MCCL_1217: Glycyl-tRNA synthetase (EC 6.1.1.14)
Glycyl-tRNA synthetase (EC 6.1.1.14)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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