Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog T-box(Cys) - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Cys-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 2 1
Staphylococcus capitis SK14 2 1
Staphylococcus epidermidis ATCC 12228 2 1
Staphylococcus carnosus subsp. carnosus TM300 2 1
Staphylococcus haemolyticus JCSC1435 2 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 2 1
Macrococcus caseolyticus JCSC5402 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
cysE
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -323
score = 68.35
sequence = TAAAACGAAGGATTA...

Gene: SA0487: Serine acetyltransferase (EC 2.3.1.30)
*
Staphylococcus capitis SK14

Site:
position = -306
score = 86.63
sequence = AATGAATCAAAGGAT...

Gene: STACA0001_0506: Serine acetyltransferase (EC 2.3.1.30)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -300
score = 65.32
sequence = TGATTCAAAGGATTA...

Gene: SE0291: Serine acetyltransferase (EC 2.3.1.30)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -240
score = 67.58
sequence = TGATTACTAAGGATT...

Gene: Sca_0185: Serine acetyltransferase (EC 2.3.1.30)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -325
score = 62.93
sequence = TTTAAAGGCGAAGGA...

Gene: SH2480: Serine acetyltransferase (EC 2.3.1.30)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -258
score = 71.11
sequence = GAAATCAACAAAGGA...

Gene: SSP2227: Serine acetyltransferase (EC 2.3.1.30)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -153
score = 73.57
sequence = TCAAGGTATGAGACT...

Gene: MCCL_1879: Serine acetyltransferase (EC 2.3.1.30)
Serine acetyltransferase (EC 2.3.1.30)
cysS
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0488: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
 
Staphylococcus capitis SK14

Gene: STACA0001_0505: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0292: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0186: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
 
Staphylococcus haemolyticus JCSC1435

Gene: SH2479: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP2226: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1878: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
Cysteinyl-tRNA synthetase (EC 6.1.1.16)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise