Regulog T-box(Cys) - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Cys-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - T-box
- By effector - Cys-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 2 | 1 |
| Staphylococcus capitis SK14 | 2 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 2 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 2 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 2 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 2 | 1 |
| Macrococcus caseolyticus JCSC5402 | 2 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| cysE |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -323 score = 68.35 sequence = TAAAACGAAGGATTA... Gene: SA0487: Serine acetyltransferase (EC 2.3.1.30) |
*
Staphylococcus capitis SK14 Site: position = -306 score = 86.63 sequence = AATGAATCAAAGGAT... Gene: STACA0001_0506: Serine acetyltransferase (EC 2.3.1.30) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -300 score = 65.32 sequence = TGATTCAAAGGATTA... Gene: SE0291: Serine acetyltransferase (EC 2.3.1.30) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -240 score = 67.58 sequence = TGATTACTAAGGATT... Gene: Sca_0185: Serine acetyltransferase (EC 2.3.1.30) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -325 score = 62.93 sequence = TTTAAAGGCGAAGGA... Gene: SH2480: Serine acetyltransferase (EC 2.3.1.30) |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -258 score = 71.11 sequence = GAAATCAACAAAGGA... Gene: SSP2227: Serine acetyltransferase (EC 2.3.1.30) |
*
Macrococcus caseolyticus JCSC5402 Site: position = -153 score = 73.57 sequence = TCAAGGTATGAGACT... Gene: MCCL_1879: Serine acetyltransferase (EC 2.3.1.30) |
Serine acetyltransferase (EC 2.3.1.30) |
| cysS |
Gene: SA0488: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Gene: STACA0001_0505: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Gene: SE0292: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Gene: Sca_0186: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Gene: SH2479: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Gene: SSP2226: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Gene: MCCL_1878: Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Cysteinyl-tRNA synthetase (EC 6.1.1.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |