Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog S15 - Enterobacteriales

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 1 1
Salmonella typhimurium LT2 1 1
Citrobacter koseri ATCC BAA-895 1 1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1 1
Enterobacter sp. 638 1 1
Erwinia amylovora ATCC 49946 1 1
Yersinia pestis KIM 1 1
Serratia proteamaculans 568 1 1
Erwinia carotovora subsp. atroseptica SCRI1043 1 1
Edwardsiella tarda EIB202 1 1
Proteus mirabilis HI4320 1 1
Photorhabdus luminescens subsp. laumondii TTO1 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rpsO
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -59
score = 106.35
sequence = CTGGGATCGCTGAAT...

Gene: b3165: SSU ribosomal protein S15p (S13e)
*
Salmonella typhimurium LT2

Site:
position = -60
score = 108.81
sequence = CTGGGATCGCTGAAT...

Gene: STM3283: SSU ribosomal protein S15p (S13e)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -60
score = 97.17
sequence = ATGGGGTCGCTGAAT...

Gene: CKO_04564: SSU ribosomal protein S15p (S13e)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -60
score = 113.49
sequence = CAGGGGTCGCTGAAT...

Gene: KPN_03573: SSU ribosomal protein S15p (S13e)
*
Enterobacter sp. 638

Site:
position = -59
score = 105.24
sequence = CTGGGGTTGCTGAAT...

Gene: Ent638_3602: SSU ribosomal protein S15p (S13e)
*
Erwinia amylovora ATCC 49946

Site:
position = -61
score = 106.82
sequence = ATTGGGTGGCTGAAT...

Gene: EAM_3068: SSU ribosomal protein S15p (S13e)
*
Yersinia pestis KIM

Site:
position = -61
score = 102.51
sequence = TGGGTTGCTGAATTA...

Gene: y0691: SSU ribosomal protein S15p (S13e)
*
Serratia proteamaculans 568

Site:
position = -59
score = 105.04
sequence = TGGGTTGCTGAATTA...

Gene: Spro_0492: SSU ribosomal protein S15p (S13e)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -59
score = 106.25
sequence = TGGGTGGCTGAATTA...

Gene: ECA0715: SSU ribosomal protein S15p (S13e)
*
Edwardsiella tarda EIB202

Site:
position = -62
score = 109.67
sequence = TGGGTTGCTGAATTA...

Gene: ETAE_0408: SSU ribosomal protein S15p (S13e)
*
Proteus mirabilis HI4320

Site:
position = -58
score = 102.85
sequence = TGGATAGCTGAATTA...

Gene: PMI3421: SSU ribosomal protein S15p (S13e)
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -64
score = 96.3
sequence = GTTGGGTGGCTGAAT...

Gene: plu4526: SSU ribosomal protein S15p (S13e)
SSU ribosomal protein S15p (S13e)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD