Regulog S15 - Enterobacteriales
| Regulator type: | RNA regulatory element |
| Name: | S15 |
| RFAM: | RF00114 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By RNA motif - S15
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 1 | 1 |
| Salmonella typhimurium LT2 | 1 | 1 |
| Citrobacter koseri ATCC BAA-895 | 1 | 1 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 1 | 1 |
| Enterobacter sp. 638 | 1 | 1 |
| Erwinia amylovora ATCC 49946 | 1 | 1 |
| Yersinia pestis KIM | 1 | 1 |
| Serratia proteamaculans 568 | 1 | 1 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 1 | 1 |
| Edwardsiella tarda EIB202 | 1 | 1 |
| Proteus mirabilis HI4320 | 1 | 1 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 1 | 1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| rpsO |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -59 score = 106.35 sequence = CTGGGATCGCTGAAT... Gene: b3165: SSU ribosomal protein S15p (S13e) |
*
Salmonella typhimurium LT2 Site: position = -60 score = 108.81 sequence = CTGGGATCGCTGAAT... Gene: STM3283: SSU ribosomal protein S15p (S13e) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -60 score = 97.17 sequence = ATGGGGTCGCTGAAT... Gene: CKO_04564: SSU ribosomal protein S15p (S13e) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -60 score = 113.49 sequence = CAGGGGTCGCTGAAT... Gene: KPN_03573: SSU ribosomal protein S15p (S13e) |
*
Enterobacter sp. 638 Site: position = -59 score = 105.24 sequence = CTGGGGTTGCTGAAT... Gene: Ent638_3602: SSU ribosomal protein S15p (S13e) |
*
Erwinia amylovora ATCC 49946 Site: position = -61 score = 106.82 sequence = ATTGGGTGGCTGAAT... Gene: EAM_3068: SSU ribosomal protein S15p (S13e) |
*
Yersinia pestis KIM Site: position = -61 score = 102.51 sequence = TGGGTTGCTGAATTA... Gene: y0691: SSU ribosomal protein S15p (S13e) |
*
Serratia proteamaculans 568 Site: position = -59 score = 105.04 sequence = TGGGTTGCTGAATTA... Gene: Spro_0492: SSU ribosomal protein S15p (S13e) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -59 score = 106.25 sequence = TGGGTGGCTGAATTA... Gene: ECA0715: SSU ribosomal protein S15p (S13e) |
*
Edwardsiella tarda EIB202 Site: position = -62 score = 109.67 sequence = TGGGTTGCTGAATTA... Gene: ETAE_0408: SSU ribosomal protein S15p (S13e) |
*
Proteus mirabilis HI4320 Site: position = -58 score = 102.85 sequence = TGGATAGCTGAATTA... Gene: PMI3421: SSU ribosomal protein S15p (S13e) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -64 score = 96.3 sequence = GTTGGGTGGCTGAAT... Gene: plu4526: SSU ribosomal protein S15p (S13e) |
SSU ribosomal protein S15p (S13e) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |