Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsO gene

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -60
Score: 97.17
Sequence: ATGGGGTCGCTGAAT...
Locus tag: CKO_04564
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 97.2 ATGGGGTCGCTGAAT... CKO_04564
Edwardsiella tarda EIB202
Position: -62
Score: 109.67
Sequence: TGGGTTGCTGAATTA...
Locus tag: ETAE_0408
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -62 109.7 TGGGTTGCTGAATTA... ETAE_0408
Enterobacter sp. 638
Position: -59
Score: 105.24
Sequence: CTGGGGTTGCTGAAT...
Locus tag: Ent638_3602
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -59 105.2 CTGGGGTTGCTGAAT... Ent638_3602
Erwinia amylovora ATCC 49946
Position: -61
Score: 106.82
Sequence: ATTGGGTGGCTGAAT...
Locus tag: EAM_3068
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -61 106.8 ATTGGGTGGCTGAAT... EAM_3068
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -59
Score: 106.25
Sequence: TGGGTGGCTGAATTA...
Locus tag: ECA0715
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -59 106.2 TGGGTGGCTGAATTA... ECA0715
Escherichia coli str. K-12 substr. MG1655
Position: -59
Score: 106.35
Sequence: CTGGGATCGCTGAAT...
Locus tag: b3165
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -59 106.3 CTGGGATCGCTGAAT... b3165
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -60
Score: 113.49
Sequence: CAGGGGTCGCTGAAT...
Locus tag: KPN_03573
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 113.5 CAGGGGTCGCTGAAT... KPN_03573
Photorhabdus luminescens subsp. laumondii TTO1
Position: -64
Score: 96.3
Sequence: GTTGGGTGGCTGAAT...
Locus tag: plu4526
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -64 96.3 GTTGGGTGGCTGAAT... plu4526
Proteus mirabilis HI4320
Position: -58
Score: 102.85
Sequence: TGGATAGCTGAATTA...
Locus tag: PMI3421
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -58 102.8 TGGATAGCTGAATTA... PMI3421
Salmonella typhimurium LT2
Position: -60
Score: 108.81
Sequence: CTGGGATCGCTGAAT...
Locus tag: STM3283
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 108.8 CTGGGATCGCTGAAT... STM3283
Serratia proteamaculans 568
Position: -59
Score: 105.04
Sequence: TGGGTTGCTGAATTA...
Locus tag: Spro_0492
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -59 105 TGGGTTGCTGAATTA... Spro_0492
Yersinia pestis KIM
Position: -61
Score: 102.51
Sequence: TGGGTTGCTGAATTA...
Locus tag: y0691
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -61 102.5 TGGGTTGCTGAATTA... y0691