Regulog His_leader - Shewanellaceae
Regulator type: | RNA regulatory element |
Name: | His_leader |
RFAM: | RF00514 |
Regulation mode: | |
Biological process: | Histidine biosynthesis |
Effector: | |
Phylum: | Proteobacteria |

Member of regulog collections
- By taxonomy - Shewanellaceae
- By RNA motif - His_leader
- By pathway - Histidine biosynthesis
Genome | Genes | Operons |
---|---|---|
Shewanella oneidensis MR-1 | 8 | 1 |
Shewanella putrefaciens CN-32 | 8 | 1 |
Shewanella sp W3-18-1 | 8 | 1 |
Shewanella sp ANA-3 | 8 | 1 |
Shewanella sp MR-4 | 8 | 1 |
Shewanella sp MR-7 | 8 | 1 |
Shewanella baltica OS155 | 8 | 1 |
Shewanella denitrificans OS217 | 8 | 1 |
Shewanella frigidimarina NCIMB 400 | 8 | 1 |
Shewanella amazonensis SB2B | 8 | 1 |
Shewanella loihica PV-4 | 8 | 1 |
Shewanella pealeana ATCC 700345 | 8 | 1 |
Shewanella halifaxensis HAW-EB4 | 8 | 1 |
Shewanella piezotolerans WP3 | 8 | 1 |
Shewanella sediminis HAW-EB3 | 8 | 1 |
Shewanella woodyi ATCC 51908 | 6 | 1 |
Genes | Function | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CRON 1. | |||||||||||||||||
hisG |
*
Shewanella oneidensis MR-1 Site: position = -196 score = 47.26 sequence = ACCATCATCACCACC... Gene: SO_2074: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella putrefaciens CN-32 Site: position = -77 score = 48.91 sequence = CACCATCACCACCAT... Gene: Sputcn32_2178: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella sp W3-18-1 Site: position = -79 score = 48.91 sequence = TCCACCATCACCACC... Gene: Sputw3181_1831: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella sp ANA-3 Site: position = -271 score = 40.76 sequence = ACCATCATCACCACC... Gene: Shewana3_1854: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella sp MR-4 Site: position = -172 score = 40.76 sequence = ACCATCATCACCACC... Gene: Shewmr4_1800: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella sp MR-7 Site: position = -269 score = 40.76 sequence = CATCATCACCACCAT... Gene: Shewmr7_2177: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella baltica OS155 Site: position = -305 score = 41.91 sequence = CACCATCACCACCAT... Gene: Sbal_2425: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella denitrificans OS217 Site: position = -232 score = 48.98 sequence = TGCACCATCATCACC... Gene: Sden_1618: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -180 score = 45.09 sequence = TCCACCATCATCACC... Gene: Sfri_1720: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella amazonensis SB2B Site: position = -171 score = 44.16 sequence = CATCATCACCATCAT... Gene: Sama_1941: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella loihica PV-4 Site: position = -188 score = 46.85 sequence = CATCATCACCATCAT... Gene: Shew_2197: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella pealeana ATCC 700345 Site: position = -175 score = 53.81 sequence = CATCATCATCACCAT... Gene: Spea_2456: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -177 score = 58.05 sequence = TGCATCATCATCACC... Gene: Shal_1824: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella piezotolerans WP3 Site: position = -173 score = 53.28 sequence = CATCATCATCACCAT... Gene: swp_3001: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella sediminis HAW-EB3 Site: position = -170 score = 48.95 sequence = CATCATCATCACCAT... Gene: Ssed_2541: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella woodyi ATCC 51908 Site: position = -207 score = 46.83 sequence = TGCATCATCACCACC... Gene: Swoo_2092: ATP phosphoribosyltransferase (EC 2.4.2.17) |
ATP phosphoribosyltransferase (EC 2.4.2.17) |
hisD |
Gene: SO_2073: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sputcn32_2179: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sputw3181_1830: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shewana3_1853: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shewmr4_1799: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shewmr7_2178: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sbal_2426: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sden_1617: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sfri_1719: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sama_1942: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shew_2198: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Spea_2457: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shal_1823: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: swp_3003: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Ssed_2542: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Swoo_2091: Histidinol dehydrogenase (EC 1.1.1.23) |
Histidinol dehydrogenase (EC 1.1.1.23) |
hisC |
Gene: SO_2072: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sputcn32_2180: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sputw3181_1829: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shewana3_1852: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shewmr4_1798: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shewmr7_2179: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sbal_2427: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sden_1616: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sfri_1718: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sama_1943: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shew_2199: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Spea_2458: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shal_1822: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: swp_3004: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Ssed_2543: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Swoo_2090: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
hisB |
Gene: SO_2071: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sputcn32_2181: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sputw3181_1828: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shewana3_1851: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shewmr4_1797: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shewmr7_2180: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sbal_2428: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sden_1615: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sfri_1717: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sama_1944: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shew_2200: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Spea_2459: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shal_1821: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: swp_3005: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Ssed_2544: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Swoo_2089: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
hisH |
Gene: SO_2070: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sputcn32_2182: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sputw3181_1827: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shewana3_1850: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shewmr4_1796: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shewmr7_2181: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sbal_2429: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sden_1614: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sfri_1716: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sama_1945: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shew_2201: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Spea_2460: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shal_1820: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: swp_3006: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Ssed_2545: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Swoo_2088: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
hisA |
Gene: SO_2069: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sputcn32_2183: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sputw3181_1826: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shewana3_1849: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shewmr4_1795: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shewmr7_2182: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sbal_2430: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sden_1613: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sfri_1715: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sama_1946: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shew_2202: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Spea_2461: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shal_1819: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: swp_3007: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Ssed_2546: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Swoo_2087: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
hisF |
Gene: SO_2068: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sputcn32_2184: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sputw3181_1825: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shewana3_1848: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shewmr4_1794: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shewmr7_2183: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sbal_2431: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sden_1612: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sfri_1714: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sama_1947: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shew_2203: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Spea_2462: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shal_1818: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: swp_3008: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Ssed_2547: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Swoo_2082: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
hisI |
Gene: SO_2067: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sputcn32_2185: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sputw3181_1824: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shewana3_1847: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shewmr4_1793: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shewmr7_2184: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sbal_2432: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sden_1611: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sfri_1713: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sama_1948: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shew_2204: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Spea_2463: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shal_1817: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: swp_3009: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Ssed_2548: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Swoo_2081: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |