Regulog ydaO-yuaA - Desulfovibrionales
| Regulator type: | RNA regulatory element |
| Name: | ydaO-yuaA |
| RFAM: | RF00379 |
| Regulation mode: | |
| Biological process: | Cell wall metabolism; Osmotic stress response |
| Effector: | |
| Phylum: | Proteobacteria/delta |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By RNA motif - ydaO-yuaA
- By pathway - Cell wall metabolism
- By pathway - Osmotic stress response
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | ||
| Desulfovibrio vulgaris str. Miyazaki F | ||
| Desulfovibrio desulfuricans G20 | ||
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | ||
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | ||
| Desulfovibrio magneticus RS-1 | 1 | 1 |
| Lawsonia intracellularis PHE/MN1-00 | ||
| Desulfomicrobium baculatum DSM 4028 | ||
| Desulfohalobium retbaense DSM 5692 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| ydaO |
|
|
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -440 score = 75.07 sequence = CTCGCCCTACGTCGA... Gene: DMR_44700: putative metabolite transporter, COG0531 |
|
|
|
putative metabolite transporter, COG0531 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |