Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog yybP-ykoY - Thermotogales

Properties
Regulator type: RNA regulatory element
Name: yybP-ykoY
RFAM: RF00080
Regulation mode:
Biological process:
Effector:
Phylum: Thermotogae
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Thermotoga maritima MSB8
Thermotoga sp. RQ2
Thermotoga neapolitana DSM 4359
Thermotoga petrophila RKU-1
Thermotoga naphthophila RKU-10
Thermotoga lettingae TMO
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1
Petrotoga mobilis SJ95 1 1
Thermotogales bacterium TBF 19.5.1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
atcL
 
Thermotoga maritima MSB8
 
Thermotoga sp. RQ2
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga naphthophila RKU-10
 
Thermotoga lettingae TMO
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
*
Petrotoga mobilis SJ95

Site:
position = -179
score = 58.47
sequence = ATTCAAAAAAAGGGG...

Gene: Pmob_0991: Calcium-transporting ATPase (EC 3.6.3.8)
 
Thermotogales bacterium TBF 19.5.1
Calcium-transporting ATPase (EC 3.6.3.8)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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