Regulog Purine - Shewanellaceae

Properties
Regulator type:	RNA regulatory element
Name:	Purine
RFAM:	RF00167
Regulation mode:
Biological process:	Purine metabolism
Effector:	Adenine; Guanine
Phylum:	Proteobacteria

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - Purine
By effector - Adenine
By effector - Guanine
By pathway - Purine metabolism

Statistics of regulated genes
Genome	Genes	Operons
Shewanella oneidensis MR-1
Shewanella putrefaciens CN-32
Shewanella sp W3-18-1
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella baltica OS155
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella pealeana ATCC 700345	2	2
Shewanella halifaxensis HAW-EB4	2	2
Shewanella piezotolerans WP3	1	1
Shewanella sediminis HAW-EB3	1	1
Shewanella woodyi ATCC 51908	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
add	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B	Shewanella loihica PV-4	* Shewanella pealeana ATCC 700345 Site: position = -193 score = 71.28 sequence = AATATTTACCGTTAA... Gene: Spea_3392: Adenosine deaminase (EC 3.5.4.4)	* Shewanella halifaxensis HAW-EB4 Site: position = -189 score = 72.85 sequence = AAAATTAGCGGTTAA... Gene: Shal_3477: Adenosine deaminase (EC 3.5.4.4)	* Shewanella piezotolerans WP3 Site: position = -125 score = 67.52 sequence = AATTCGCATCCGCTA... Gene: swp_4887: Adenosine deaminase (EC 3.5.4.4)	* Shewanella sediminis HAW-EB3 Site: position = -197 score = 65.75 sequence = CCTAGCCCCTCGAAT... Gene: Ssed_3524: Adenosine deaminase (EC 3.5.4.4)	* Shewanella woodyi ATCC 51908 Site: position = -241 score = 71.74 sequence = CCTCCACAAAACTTA... Gene: Swoo_1121: Adenosine deaminase (EC 3.5.4.4)	Adenosine deaminase (EC 3.5.4.4)

CRON 2.
pbuG	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B	Shewanella loihica PV-4	* Shewanella pealeana ATCC 700345 Site: position = -203 score = 53.76 sequence = GCGCCAACAATTTAT... Gene: Spea_3662: Guanine/hypoxanthine permease PbuG	* Shewanella halifaxensis HAW-EB4 Site: position = -240 score = 53.76 sequence = GCGCCAACAATTTAT... Gene: Shal_3750: Guanine/hypoxanthine permease PbuG	Shewanella piezotolerans WP3	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Guanine/hypoxanthine permease PbuG

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Purine - Shewanellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --