Regulog AgaR - Pasteurellales
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - AgaR
- By taxonomy - Pasteurellales
- By TF family - DeoR
- By effector - N-acetylgalactosamine-6-phosphate
- By effector - Galactosamine-6-phosphate
- By pathway - N-acetylgalactosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | ||
| Aggregatibacter aphrophilus NJ8700 | ||
| Pasteurella multocida subsp. multocida str. Pm70 | ||
| Mannheimia succiniciproducens MBEL55E | ||
| Actinobacillus succinogenes 130Z | ||
| Haemophilus somnus 2336 | ||
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | ||
| Haemophilus ducreyi 35000HP | ||
| Haemophilus parasuis SH0165 | 8 | 1 |
| Genes | Function | |||||||||
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| CRON 1. | ||||||||||
| agaR |
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Haemophilus parasuis SH0165 Site: position = -98 score = 4.76733 sequence = TTTTCGAATATTTTCG Gene: HAPS_0195: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
| agaS |
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Gene: HAPS_0194: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) |
Galactosamine-6-phosphate isomerase (EC 5.3.1.-) |
| gadV |
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Gene: HAPS_0193: Predicted galactosamine disaccharide-specific PTS system, IIB component (EC 2.7.1.69) |
Predicted galactosamine disaccharide-specific PTS system, IIB component (EC 2.7.1.69) |
| gadW |
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Gene: HAPS_0192: Predicted galactosamine disaccharide-specific PTS system, IIC component (EC 2.7.1.69) |
Predicted galactosamine disaccharide-specific PTS system, IIC component (EC 2.7.1.69) |
| gadE |
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Gene: HAPS_0191: Predicted galactosamine disaccharide-specific PTS system, IID component (EC 2.7.1.69) |
Predicted galactosamine disaccharide-specific PTS system, IID component (EC 2.7.1.69) |
| bgaZ |
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Gene: HAPS_0190: Predicted galactosamine disaccharide-phosphate-specific beta-galactosidase (EC 3.2.1.23) |
Predicted galactosamine disaccharide-phosphate-specific beta-galactosidase (EC 3.2.1.23) |
| gadF |
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Gene: HAPS_0189: Predicted galactosamine disaccharide-specific PTS system, IIA component (EC 2.7.1.69) |
Predicted galactosamine disaccharide-specific PTS system, IIA component (EC 2.7.1.69) |
| agaY-II |
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Gene: HAPS_0188: Tagatose-1,6-bisphosphate aldolase, alternative (EC 4.1.2.-) |
Tagatose-1,6-bisphosphate aldolase, alternative (EC 4.1.2.-) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |