Regulog AgaR - Pasteurellales

Properties
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

By trascription factor - AgaR
By taxonomy - Pasteurellales
By TF family - DeoR
By effector - N-acetylgalactosamine-6-phosphate
By effector - Galactosamine-6-phosphate
By pathway - N-acetylgalactosamine utilization

Statistics of regulated genes
Genome	Genes	Operons
Haemophilus influenzae Rd KW20
Aggregatibacter aphrophilus NJ8700
Pasteurella multocida subsp. multocida str. Pm70
Mannheimia succiniciproducens MBEL55E
Actinobacillus succinogenes 130Z
Haemophilus somnus 2336
Actinobacillus pleuropneumoniae serovar 7 str. AP76
Haemophilus ducreyi 35000HP
Haemophilus parasuis SH0165	8	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
agaR	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	* Haemophilus parasuis SH0165 Site: position = -98 score = 4.76733 sequence = TTTTCGAATATTTTCG Gene: HAPS_0195: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family	Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
agaS	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0194: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
gadV	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0193: Predicted galactosamine disaccharide-specific PTS system, IIB component (EC 2.7.1.69)	Predicted galactosamine disaccharide-specific PTS system, IIB component (EC 2.7.1.69)
gadW	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0192: Predicted galactosamine disaccharide-specific PTS system, IIC component (EC 2.7.1.69)	Predicted galactosamine disaccharide-specific PTS system, IIC component (EC 2.7.1.69)
gadE	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0191: Predicted galactosamine disaccharide-specific PTS system, IID component (EC 2.7.1.69)	Predicted galactosamine disaccharide-specific PTS system, IID component (EC 2.7.1.69)
bgaZ	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0190: Predicted galactosamine disaccharide-phosphate-specific beta-galactosidase (EC 3.2.1.23)	Predicted galactosamine disaccharide-phosphate-specific beta-galactosidase (EC 3.2.1.23)
gadF	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0189: Predicted galactosamine disaccharide-specific PTS system, IIA component (EC 2.7.1.69)	Predicted galactosamine disaccharide-specific PTS system, IIA component (EC 2.7.1.69)
agaY-II	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_0188: Tagatose-1,6-bisphosphate aldolase, alternative (EC 4.1.2.-)	Tagatose-1,6-bisphosphate aldolase, alternative (EC 4.1.2.-)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog AgaR - Pasteurellales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --