Regulog ArgR - Pasteurellales
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ArgR
- By taxonomy - Pasteurellales
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | 7 | 3 |
| Aggregatibacter aphrophilus NJ8700 | 6 | 2 |
| Pasteurella multocida subsp. multocida str. Pm70 | 10 | 6 |
| Mannheimia succiniciproducens MBEL55E | 10 | 6 |
| Actinobacillus succinogenes 130Z | 14 | 7 |
| Haemophilus somnus 2336 | 6 | 2 |
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 11 | 5 |
| Haemophilus ducreyi 35000HP | 9 | 4 |
| Haemophilus parasuis SH0165 | 7 | 3 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| arcD |
|
|
Gene: PM0162: Arginine/ornithine antiporter |
Gene: MS0552: Arginine/ornithine antiporter |
Gene: Asuc_1416: Arginine/ornithine antiporter |
|
2
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_1141: Arginine/ornithine antiporter Gene: APP7_1140: Arginine/ornithine antiporter |
*
Haemophilus ducreyi 35000HP Site: position = -126 score = 4.10329 sequence = ATATAGTTTTTATTCATT Site: position = -50 score = 4.24502 sequence = TATGATAAATTATGCACT Gene: HD0568: Arginine/ornithine antiporter |
|
Arginine/ornithine antiporter |
| HD0567 |
|
|
|
|
|
|
|
Gene: HD0567: hypothetical protein |
|
Hypothetical protein |
| argE |
|
|
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -1 score = 4.77316 sequence = AATGACTAATTATGCTAT Site: position = 20 score = 4.99783 sequence = TATGCATAAATATTTAAA Gene: PM1117: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -65 score = 4.84488 sequence = AATGATTAATTATGCTAT Site: position = -44 score = 4.76958 sequence = TCTGCATAATTATTTAAA Gene: MS0233: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Actinobacillus succinogenes 130Z Site: position = -68 score = 4.65101 sequence = AGTGATTAATTATGCTAT Site: position = -47 score = 4.64132 sequence = TCTGCATAAATATTTAAA Gene: Asuc_0256: Acetylornithine deacetylase (EC 3.5.1.16) |
|
Gene: APP7_1143: Acetylornithine deacetylase (EC 3.5.1.16) |
Gene: HD0566: Acetylornithine deacetylase (EC 3.5.1.16) |
Gene: HAPS_0453: Acetylornithine deacetylase (EC 3.5.1.16) |
Acetylornithine deacetylase (EC 3.5.1.16) |
| CRON 2. | ||||||||||
| argR |
*
Haemophilus influenzae Rd KW20 Site: position = -51 score = 5.04876 sequence = AGTGAATTTTTATGCAAT Gene: HI1209: Arginine metabolism transcriptional regulator ArgR |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -80 score = 3.9925 sequence = AAAGCCTAAATAATAATT Gene: NT05HA_1110: Arginine metabolism transcriptional regulator ArgR |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = 13 score = 5.2682 sequence = TTTGCATATTTATGCAAA Gene: PM0549: Arginine metabolism transcriptional regulator ArgR |
*
Mannheimia succiniciproducens MBEL55E Site: position = -50 score = 5.21866 sequence = TTTGAATTTTTATGCAAA Gene: MS1267: Arginine metabolism transcriptional regulator ArgR |
*
Actinobacillus succinogenes 130Z Site: position = -43 score = 4.23222 sequence = CTTAAATTTTTATTGATT Site: position = -22 score = 5.0249 sequence = TTTGAATTTTTATGCAGA Gene: Asuc_1613: Arginine metabolism transcriptional regulator ArgR |
*
Haemophilus somnus 2336 Site: position = -83 score = 4.08054 sequence = TAAGAATATAAATATAAA Site: position = -51 score = 4.51419 sequence = TTTGCATTTTTATGCAGC Gene: HSM_1540: Arginine metabolism transcriptional regulator ArgR |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -117 score = 4.08265 sequence = AATAAACTAATATTTATA Gene: APP7_1346: Arginine metabolism transcriptional regulator ArgR |
Gene: HD0262: Arginine metabolism transcriptional regulator ArgR |
Gene: HAPS_0980: Arginine metabolism transcriptional regulator ArgR |
Arginine metabolism transcriptional regulator ArgR |
| yfcH |
Gene: HI1208: Conserved hypothetical protein |
Gene: NT05HA_1111: Conserved hypothetical protein |
Gene: PM0548: Conserved hypothetical protein |
Gene: MS1268: Conserved hypothetical protein |
Gene: Asuc_1614: Conserved hypothetical protein |
Gene: HSM_1541: Conserved hypothetical protein |
Gene: APP7_1345: Conserved hypothetical protein |
Gene: HD0261: Conserved hypothetical protein |
Gene: HAPS_0979: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 3. | ||||||||||
| argA |
|
|
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -48 score = 4.95596 sequence = AATGAATATAAATTCAGT Site: position = -27 score = 4.19412 sequence = AATGAATAAGTATTAAAG Gene: PM0828: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -52 score = 5.13293 sequence = AATGAATATAAATTCAAA Site: position = -31 score = 4.64713 sequence = AGTGAATAATTATATAAA Gene: MS0754: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Actinobacillus succinogenes 130Z Site: position = -48 score = 5.02222 sequence = TTTGCATATAAATTCATA Site: position = -27 score = 4.9124 sequence = AATGAATAATTATTTATC Gene: Asuc_0891: N-acetylglutamate synthase (EC 2.3.1.1) |
|
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -79 score = 4.31833 sequence = TACAAATTTTAATTCAAT Site: position = -58 score = 5.44231 sequence = ATTGCATAAATATTCATT Gene: APP7_0740: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Haemophilus ducreyi 35000HP Site: position = -76 score = 4.42871 sequence = TGTGAATATTTTTGCAAA Gene: HD1384: N-acetylglutamate synthase (EC 2.3.1.1) |
|
N-acetylglutamate synthase (EC 2.3.1.1) |
| CRON 4. | ||||||||||
| argC |
|
|
Gene: PM1118: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -53 score = 5.08162 sequence = ATAGCATAATTAATCATT Site: position = -74 score = 4.93289 sequence = TTTAAATAATTATGCAGA Gene: MS0235: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Actinobacillus succinogenes 130Z Site: position = -52 score = 4.81614 sequence = ATAGCATAATTAATCACT Site: position = -73 score = 4.88456 sequence = TTTAAATATTTATGCAGA Gene: Asuc_0255: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
|
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -107 score = 5.01289 sequence = TTTGATTAATTATTCACT Site: position = -86 score = 4.61892 sequence = TGTGAATTTTTATTCTGT Gene: APP7_0243: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
Gene: HD0890: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
|
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| argB |
|
|
Gene: PM1119: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: MS0236: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Asuc_0254: Acetylglutamate kinase (EC 2.7.2.8) |
|
Gene: APP7_0244: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: HD0891: Acetylglutamate kinase (EC 2.7.2.8) |
|
Acetylglutamate kinase (EC 2.7.2.8) |
| argH |
*
Haemophilus influenzae Rd KW20 Site: position = -34 score = 4.91341 sequence = ATAGAATAATTAATTAAA Site: position = -55 score = 4.94352 sequence = TATGAATAAATATGCACA Gene: HI0811: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: NT05HA_0072: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: PM1120: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: MS0237: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Asuc_0253: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: HSM_1103: Argininosuccinate lyase (EC 4.3.2.1) |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -82 score = 4.82891 sequence = TCTGCATATTTATGCAAA Site: position = -103 score = 4.21286 sequence = AATAGATAATTATTGAAT Gene: APP7_1238: Argininosuccinate lyase (EC 4.3.2.1) |
*
Haemophilus ducreyi 35000HP Site: position = -78 score = 5.2682 sequence = TTTGCATATTTATGCAAA Site: position = -99 score = 4.41682 sequence = CTTAAATAATTATTGAAA Gene: HD1033: Argininosuccinate lyase (EC 4.3.2.1) |
*
Haemophilus parasuis SH0165 Site: position = -86 score = 5.4065 sequence = ATTGCATAATTATGCATA Site: position = -107 score = 4.51357 sequence = TATAAATAATTATTGAGT Gene: HAPS_0797: Argininosuccinate lyase (EC 4.3.2.1) |
Argininosuccinate lyase (EC 4.3.2.1) |
| argD |
|
|
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -84 score = 5.21965 sequence = GATGAATATTTATTCATT Site: position = -63 score = 4.60324 sequence = ATTGACTAAATATTTTTA Gene: PM0344: Acetylornithine aminotransferase (EC 2.6.1.11) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -72 score = 5.20666 sequence = TTTGACTAATTATTCAAT Gene: MS0782: Acetylornithine aminotransferase (EC 2.6.1.11) |
*
Actinobacillus succinogenes 130Z Site: position = -86 score = 5.45592 sequence = ATTGAATTTTTATTCAAA Site: position = -65 score = 5.02874 sequence = ATTGCATAATAAATCAAA Gene: Asuc_0913: Acetylornithine aminotransferase (EC 2.6.1.11) |
|
Gene: APP7_0245: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: HD0892: Acetylornithine aminotransferase (EC 2.6.1.11) |
|
Acetylornithine aminotransferase (EC 2.6.1.11) |
| CRON 5. | ||||||||||
| carA |
|
|
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -254 score = 4.84755 sequence = TTTGTATTTTTATGCAAT Site: position = -233 score = 4.83461 sequence = GTTGTATAAATATTCATT Site: position = -197 score = 4.19526 sequence = CTTGAATAATTACGTATT Gene: PM1502: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: MS2237: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Actinobacillus succinogenes 130Z Site: position = -260 score = 5.22585 sequence = AATGAATTTTTATGCAAA Site: position = -239 score = 4.87058 sequence = AAAGCATAAATAATCATT Gene: Asuc_0545: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
|
|
Gene: HD0235: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Haemophilus parasuis SH0165 Site: position = -282 score = 4.26176 sequence = AATTCAAATTTATTCATT Site: position = -183 score = 4.81021 sequence = GTTGAATAAAAATGCATT Site: position = -162 score = 4.70335 sequence = TTAACATAATTATTTATT Gene: HAPS_1892: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
| carB |
|
|
Gene: PM1505: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: MS2236: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: Asuc_0546: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
|
|
Gene: HD0233: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: HAPS_1893: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
| CRON 6. | ||||||||||
| artP |
*
Haemophilus influenzae Rd KW20 Site: position = -82 score = 3.66317 sequence = TGGGATTTTTTATTAATA Site: position = -61 score = 4.96002 sequence = CTTGCATAATTATGCATA Gene: HI1180: Arginine ABC transporter, ATP-binding protein |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -73 score = 5.23045 sequence = GTTGCATAATTATTCATA Gene: NT05HA_0201: Arginine ABC transporter, ATP-binding protein |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -66 score = 5.33331 sequence = TTTGCATAATTATGCAAT Gene: PM0123: Arginine ABC transporter, ATP-binding protein |
*
Mannheimia succiniciproducens MBEL55E Site: position = -68 score = 5.4065 sequence = ATTGCATAATTATGCAAA Gene: MS0219: Arginine ABC transporter, ATP-binding protein |
*
Actinobacillus succinogenes 130Z Site: position = -69 score = 4.83561 sequence = ATTGCATACTTATGCAAA Site: position = -48 score = 3.73446 sequence = TATTAATATTATTGCAAT Gene: Asuc_0620: Arginine ABC transporter, ATP-binding protein |
*
Haemophilus somnus 2336 Site: position = -94 score = 4.33059 sequence = AAAGAATTTTTTTGCAAA Site: position = -73 score = 5.50546 sequence = ATTGCATATTTATTCAAA Gene: HSM_0124: Arginine ABC transporter, ATP-binding protein |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -67 score = 4.9768 sequence = CTTGCATAATTATGCAAT Gene: APP7_1406: Arginine ABC transporter, ATP-binding protein |
*
Haemophilus ducreyi 35000HP Site: position = -109 score = 4.74876 sequence = ATTGATTATTTATGCAAC Site: position = -62 score = 4.9768 sequence = CTTGCATAATTATGCATT Site: position = -41 score = 4.39884 sequence = ATTTAATATAAATTCAGT Gene: HD0811: Arginine ABC transporter, ATP-binding protein |
*
Haemophilus parasuis SH0165 Site: position = -65 score = 4.40591 sequence = CTTGCATAGTTATGCAAT Site: position = -117 score = 4.09871 sequence = TATGTATTTTAATTTTTT Site: position = -44 score = 4.19508 sequence = ATTTAATATCTATTCAGT Gene: HAPS_1066: Arginine ABC transporter, ATP-binding protein |
Arginine ABC transporter, ATP-binding protein |
| artI |
Gene: HI1179: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: NT05HA_0202: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: PM0124: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: MS0220: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: Asuc_0619: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: HSM_0125: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: APP7_1405: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: HD0812: Arginine ABC transporter, substrate-binding protein ArtI |
Gene: HAPS_1065: Arginine ABC transporter, substrate-binding protein ArtI |
Arginine ABC transporter, substrate-binding protein ArtI |
| artQ |
Gene: HI1178: Arginine ABC transporter, permease protein 1 |
Gene: NT05HA_0203: Arginine ABC transporter, permease protein 1 |
Gene: PM0125: Arginine ABC transporter, permease protein 1 |
Gene: MS0221: Arginine ABC transporter, permease protein 1 |
Gene: Asuc_0618: Arginine ABC transporter, permease protein 1 |
Gene: HSM_0126: Arginine ABC transporter, permease protein 1 |
Gene: APP7_1404: Arginine ABC transporter, permease protein 1 |
Gene: HD0813: Arginine ABC transporter, permease protein 1 |
Gene: HAPS_1064: Arginine ABC transporter, permease protein 1 |
Arginine ABC transporter, permease protein 1 |
| artM |
Gene: HI1177: Arginine ABC transporter, permease protein 2 |
Gene: NT05HA_0204: Arginine ABC transporter, permease protein 2 |
Gene: PM0126: Arginine ABC transporter, permease protein 2 |
Gene: MS0222: Arginine ABC transporter, permease protein 2 |
Gene: Asuc_0617: Arginine ABC transporter, permease protein 2 |
Gene: HSM_0127: Arginine ABC transporter, permease protein 2 |
Gene: APP7_1403: Arginine ABC transporter, permease protein 2 |
Gene: HD0814: Arginine ABC transporter, permease protein 2 |
Gene: HAPS_1063: Arginine ABC transporter, permease protein 2 |
Arginine ABC transporter, permease protein 2 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |