Regulog GlcC - Various betaproteobacteria
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor (activator) |
| Biological process: | Glycolate utilization |
| Effector: | Glycolate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By trascription factor - GlcC
- By TF family - GntR/Others
- By effector - Glycolate
- By pathway - Glycolate utilization
| Genome | Genes | Operons |
|---|---|---|
| Azoarcus sp. EbN1 | 4 | 1 |
| Thauera sp. MZ1T | ||
| Dechloromonas aromatica RCB | ||
| Nitrosomonas europaea ATCC 19718 | 3 | 1 |
| Nitrosospira multiformis ATCC 25196 | ||
| Thiobacillus denitrificans | ||
| Chromobacterium violaceum ATCC 12472 | ||
| Neisseria meningitidis MC58 | ||
| Laribacter hongkongensis HLHK9 | ||
| Methylobacillus flagellatus KT | ||
| Methylotenera mobilis JLW8 | ||
| Methylophilales bacterium HTCC2181 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| glcC |
*
Azoarcus sp. EbN1 Site: position = -130 score = 4.21869 sequence = AGTTGTCAGACAAAT Gene: ebA4487: Glycolate utilization operon transcriptional regulator, GntR family |
|
|
|
|
|
|
|
|
|
|
|
Glycolate utilization operon transcriptional regulator, GntR family |
| glcD |
Gene: ebA4490: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Tmz1t_1637: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Daro_3315: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: NE0675: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Nmul_A0173: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Tbd_0047: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
|
|
|
|
|
|
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
| glcE |
Gene: ebA4491: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: Tmz1t_1638: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: Daro_3314: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
*
Nitrosomonas europaea ATCC 19718 Site: position = -118 score = 3.64645 sequence = ACTGCTCAATCCAGG Gene: NE0674: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: Nmul_A0174: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
Gene: Tbd_0046: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
|
|
|
|
|
|
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE |
| glcF |
Gene: ebA4492: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Tmz1t_1639: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Daro_3313: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: NE0673: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Nmul_A0175: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Tbd_0044: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
|
|
|
|
|
|
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |