Regulog DgoR - Oceanospirillales/Alteromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galactonate utilization |
| Effector: | Galactonate |
| Phylum: | Proteobacteria |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - GntR/Others
- By effector - Galactonate
- By pathway - Galactonate utilization
| Genome | Genes | Operons |
|---|---|---|
| Hahella chejuensis KCTC 2396 | ||
| Marinobacter aqueolei | ||
| Marinobacter sp. ELB17 | ||
| Oceanobacter sp. RED65 | ||
| Oceanospirillum sp. MED92 | ||
| Marinomonas sp. MWYL1 | ||
| Saccharophagus degradans 2-40 | ||
| Teredinibacter turnerae T7901 | ||
| Cellvibrio japonicus Ueda107 | ||
| Chromohalobacter salexigens DSM 3043 | 2 | 1 |
| Reinekea sp. MED297 | ||
| Alcanivorax borkumensis SK2 |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| dgoA |
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Gene: Mmwyl1_2013: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
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Chromohalobacter salexigens DSM 3043 Site: position = -188 score = 4.05878 sequence = TTGTTCTACAA Gene: Csal_2606: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
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2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
| dgoK |
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Gene: Csal_2605: 2-dehydro-3-deoxygalactonokinase |
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2-dehydro-3-deoxygalactonokinase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |