Regulog LldR - Various betaproteobacteria
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By trascription factor - LldR
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Azoarcus sp. EbN1 | ||
| Thauera sp. MZ1T | 4 | 1 |
| Dechloromonas aromatica RCB | 5 | 2 |
| Nitrosomonas europaea ATCC 19718 | ||
| Nitrosospira multiformis ATCC 25196 | ||
| Thiobacillus denitrificans | ||
| Chromobacterium violaceum ATCC 12472 | 6 | 2 |
| Neisseria meningitidis MC58 | 3 | 3 |
| Laribacter hongkongensis HLHK9 | 6 | 2 |
| Methylobacillus flagellatus KT | ||
| Methylotenera mobilis JLW8 | ||
| Methylophilales bacterium HTCC2181 |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| lldP2 |
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Neisseria meningitidis MC58 Site: position = -110 score = 6.34746 sequence = AATTGGTCTTACCAATT Gene: NMB0543: L-lactate permease |
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L-lactate permease |
| CRON 2. | |||||||||||||
| lldE |
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Gene: Tmz1t_1715: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Dechloromonas aromatica RCB Site: position = -47 score = 5.99053 sequence = TATTGGTCTTACCAATT Site: position = -160 score = 4.04757 sequence = GATTGGTAAGACCAGCA Site: position = -178 score = 4.24161 sequence = CATTGGTAAGACCACAT Gene: Daro_1766: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Chromobacterium violaceum ATCC 12472 Site: position = -30 score = 6.34746 sequence = AATTGGTCTTACCAATT Gene: CV3030: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
Gene: NMB1436: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Laribacter hongkongensis HLHK9 Site: position = -36 score = 6.19238 sequence = AATTGGCCTGACCAATT Gene: LHK_02843: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
| lldG |
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Gene: Tmz1t_1717: L-lactate dehydrogenase, subunit LldG |
Gene: Daro_1765: L-lactate dehydrogenase, subunit LldG |
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Gene: CV3029: L-lactate dehydrogenase, subunit LldG |
Gene: NMB1437: L-lactate dehydrogenase, subunit LldG |
Gene: LHK_02844: L-lactate dehydrogenase, subunit LldG |
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L-lactate dehydrogenase, subunit LldG |
| lldF |
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Gene: Tmz1t_1716: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Daro_1764: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
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Gene: CV3028: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: NMB1438: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: LHK_02845: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
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L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
| dld |
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Gene: Daro_1763: D-lactate dehydrogenase |
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Gene: CV3027: D-lactate dehydrogenase |
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2
Laribacter hongkongensis HLHK9 Gene: LHK_02847: D-lactate dehydrogenase Gene: LHK_02846: D-lactate dehydrogenase |
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D-lactate dehydrogenase |
| lldP |
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Thauera sp. MZ1T Site: position = -147 score = 4.59854 sequence = AAGTGGTAAGACCACTT Gene: Tmz1t_1714: L-lactate permease |
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Gene: CV3026: L-lactate permease |
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L-lactate permease |
| CRON 3. | |||||||||||||
| lldR |
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Gene: Tmz1t_1705: Lactate-responsive regulator LldR, GntR family |
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Dechloromonas aromatica RCB Site: position = -32 score = 4.7556 sequence = TGCTGGTCTTACCAATC Site: position = -145 score = 5.48746 sequence = AATTGGTAAGACCAATA Site: position = -14 score = 4.53973 sequence = ATGTGGTCTTACCAATG Gene: Daro_1767: Lactate-responsive regulator LldR, GntR family |
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Chromobacterium violaceum ATCC 12472 Site: position = -27 score = 4.43209 sequence = ATCCGGTCAGACCAATT Gene: CV3037: Lactate-responsive regulator LldR, GntR family |
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Neisseria meningitidis MC58 Site: position = -226 score = 5.29394 sequence = GATTGGTCAGTCCAATT Gene: NMB1711: Lactate-responsive regulator LldR, GntR family |
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Laribacter hongkongensis HLHK9 Site: position = -229 score = 5.69295 sequence = AATTGGTCAGGCCAATT Gene: LHK_02842: Lactate-responsive regulator LldR, GntR family |
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Lactate-responsive regulator LldR, GntR family |
| CRON 4. | |||||||||||||
| lldP |
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Neisseria meningitidis MC58 Site: position = 15 score = 5.14005 sequence = AATTGGTTTGACCACTA Site: position = -221 score = 5.83545 sequence = AATTGGACTGACCAATC Gene: NMB1712: L-lactate permease |
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L-lactate permease |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |