Regulog LldR - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By trascription factor - LldR
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia pseudomallei K96243 | 5 | 2 |
| Burkholderia mallei ATCC 23344 | 5 | 2 |
| Burkholderia sp. 383 | 5 | 2 |
| Burkholderia cepacia AMMD | 5 | 2 |
| Burkholderia vietnamiensis G4 | 5 | 2 |
| Burkholderia glumae BGR1 | 4 | 2 |
| Burkholderia xenovorans LB400 | 4 | 2 |
| Burkholderia phymatum STM815 | 5 | 2 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| lldE |
*
Burkholderia pseudomallei K96243 Site: position = -142 score = 4.0481 sequence = GCGTGGTCAGACCAACT Gene: BPSS0321: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia mallei ATCC 23344 Site: position = -141 score = 4.0481 sequence = GCGTGGTCAGACCAACT Gene: BMAA1431: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia sp. 383 Site: position = -101 score = 5.88793 sequence = GATTGGCCCAACCAATT Gene: Bcep18194_A6081: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia cepacia AMMD Site: position = -107 score = 5.88793 sequence = GATTGGCCCAACCAATT Gene: Bamb_2803: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia vietnamiensis G4 Site: position = -100 score = 5.88793 sequence = GATTGGCCCAACCAATT Gene: Bcep1808_2856: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia glumae BGR1 Site: position = -178 score = 5.12147 sequence = AACTGGTCGTACCAGTT Gene: bglu_1g17920: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia xenovorans LB400 Site: position = -161 score = 4.30658 sequence = TCTTGGTCAGACCAACC Gene: Bxe_B1176: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Burkholderia phymatum STM815 Site: position = -121 score = 5.71413 sequence = CATTGGTCCAACCAATT Gene: Bphy_5378: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
| lldF |
Gene: BPSS0322: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: BMAA1430: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Bcep18194_A6083: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Bamb_2805: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Bcep1808_2858: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: bglu_1g17930: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Bxe_B1177: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Bphy_5376: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
| lldG |
Gene: BPSS0323: L-lactate dehydrogenase, subunit LldG |
Gene: BMAA1429: L-lactate dehydrogenase, subunit LldG |
Gene: Bcep18194_A6082: L-lactate dehydrogenase, subunit LldG |
Gene: Bamb_2804: L-lactate dehydrogenase, subunit LldG |
Gene: Bcep1808_2857: L-lactate dehydrogenase, subunit LldG |
Gene: bglu_1g17940: L-lactate dehydrogenase, subunit LldG |
Gene: Bxe_B1178: L-lactate dehydrogenase, subunit LldG |
Gene: Bphy_5377: L-lactate dehydrogenase, subunit LldG |
L-lactate dehydrogenase, subunit LldG |
| lldP |
Gene: BPSS0324: L-lactate permease |
Gene: BMAA1428: L-lactate permease |
Gene: Bcep18194_A6084: L-lactate permease |
Gene: Bamb_2806: L-lactate permease |
Gene: Bcep1808_2859: L-lactate permease |
|
|
Gene: Bphy_5375: L-lactate permease |
L-lactate permease |
| CRON 2. | |||||||||
| lldR |
*
Burkholderia pseudomallei K96243 Site: position = -323 score = 4.3161 sequence = AGTTGGTCTGACCACGC Gene: BPSS0320: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia mallei ATCC 23344 Site: position = -277 score = 4.3161 sequence = AGTTGGTCTGACCACGC Gene: BMAA1432: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia sp. 383 Site: position = -50 score = 5.3378 sequence = AATTGGTTGGGCCAATC Gene: Bcep18194_A6080: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia cepacia AMMD Site: position = -51 score = 5.3378 sequence = AATTGGTTGGGCCAATC Gene: Bamb_2802: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia vietnamiensis G4 Site: position = -50 score = 5.3378 sequence = AATTGGTTGGGCCAATC Gene: Bcep1808_2855: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia glumae BGR1 Site: position = -58 score = 5.01508 sequence = AACTGGTACGACCAGTT Gene: bglu_1g17910: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia xenovorans LB400 Site: position = -47 score = 5.12556 sequence = AATTGGTCTGACTACTT Gene: Bxe_A4447: Lactate-responsive regulator LldR, GntR family |
*
Burkholderia phymatum STM815 Site: position = -29 score = 5.38041 sequence = AATTGGTTGGACCAATG Gene: Bphy_5379: Lactate-responsive regulator LldR, GntR family |
Lactate-responsive regulator LldR, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |