Regulog LldR - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - LldR
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | ||
| Ralstonia pickettii 12J | ||
| Ralstonia metallidurans CH34 | 5 | 2 |
| Ralstonia eutropha JMP134 | 5 | 2 |
| Ralstonia eutropha H16 | 5 | 2 |
| Cupriavidus taiwanensis | 4 | 2 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| lldR |
|
|
*
Ralstonia metallidurans CH34 Site: position = -48 score = 5.31187 sequence = AATTGGTTGGACCAGTT Gene: Rmet_5900: Lactate-responsive regulator LldR, GntR family |
*
Ralstonia eutropha JMP134 Site: position = -64 score = 5.9423 sequence = AATTGGTTGGACCAATT Gene: Reut_B5449: Lactate-responsive regulator LldR, GntR family |
*
Ralstonia eutropha H16 Site: position = -113 score = 5.74826 sequence = AATTGGTTGGACCAATC Gene: H16_B0094: Lactate-responsive regulator LldR, GntR family |
*
Cupriavidus taiwanensis Site: position = -59 score = 6.20132 sequence = AATTGGTCGGACCAATT Gene: RALTA_B0086: Lactate-responsive regulator LldR, GntR family |
Lactate-responsive regulator LldR, GntR family |
| CRON 2. | |||||||
| lldE |
|
|
*
Ralstonia metallidurans CH34 Site: position = -106 score = 5.86556 sequence = AACTGGTCCAACCAATT Gene: Rmet_5899: L-lactate dehydrogenase, Fe-S oxidoreductase subunit |
*
Ralstonia eutropha JMP134 Site: position = -85 score = 6.27602 sequence = AATTGGTCCAACCAATT Gene: Reut_B5448: L-lactate dehydrogenase, Fe-S oxidoreductase subunit |
*
Ralstonia eutropha H16 Site: position = -84 score = 6.08197 sequence = GATTGGTCCAACCAATT Gene: H16_B0093: L-lactate dehydrogenase, Fe-S oxidoreductase subunit |
*
Cupriavidus taiwanensis Site: position = -83 score = 6.31498 sequence = AATTGGTCCGACCAATT Gene: RALTA_B0085: L-lactate dehydrogenase, Fe-S oxidoreductase subunit |
L-lactate dehydrogenase, Fe-S oxidoreductase subunit |
| lldG |
|
|
Gene: Rmet_5898: L-lactate dehydrogenase, subunit LldG |
Gene: Reut_B5447: L-lactate dehydrogenase, subunit LldG |
Gene: H16_B0092: L-lactate dehydrogenase, subunit LldG |
Gene: RALTA_B0084: L-lactate dehydrogenase, subunit LldG |
L-lactate dehydrogenase, subunit LldG |
| lldF |
|
|
Gene: Rmet_5897: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit |
Gene: Reut_B5446: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit |
Gene: H16_B0091: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit |
Gene: RALTA_B0083: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit |
L-lactate dehydrogenase, iron-sulfur cluster-binding subunit |
| lldP |
|
|
Gene: Rmet_5896: L-lactate permease |
Gene: Reut_B5445: L-lactate permease |
Gene: H16_B0090: L-lactate permease |
Gene: RALTA_B0082: L-lactate permease |
L-lactate permease |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |