Regulog HexR - Psychromonadaceae/Aeromonadales
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - HexR
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Psychromonas ingrahamii 37 | 19 | 11 |
| Psychromonas sp. CNPT3 | 11 | 8 |
| Moritella sp. PE36 | 12 | 7 |
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 28 | 18 |
| Aeromonas salmonicida subsp. salmonicida A449 | 30 | 18 |
| Tolumonas auensis DSM 9187 | 12 | 6 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| focA |
*
Psychromonas ingrahamii 37 Site: position = -105 score = 5.28382 sequence = ATGTAATAAAATTACAA Gene: Ping_3306: Formate efflux transporter (TC 2.A.44 family) |
Gene: PCNPT3_07735: Formate efflux transporter (TC 2.A.44 family) |
*
Moritella sp. PE36 Site: position = -156 score = 4.57982 sequence = ACGTAACTTAATTACAG Gene: PE36_18484: Formate efflux transporter (TC 2.A.44 family) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -106 score = 5.19529 sequence = TTGTAGTAAAATTACAT Gene: AHA_1942: Formate efflux transporter (TC 2.A.44 family) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -106 score = 5.19529 sequence = TTGTAGTAAAATTACAT Gene: ASA_2351: Formate efflux transporter (TC 2.A.44 family) |
*
Tolumonas auensis DSM 9187 Site: position = -108 score = 5.08332 sequence = ATGTAATAAAATTACAT Gene: Tola_0882: Formate efflux transporter (TC 2.A.44 family) |
Formate efflux transporter (TC 2.A.44 family) |
| pflB |
Gene: Ping_3307: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: PCNPT3_03056: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: PE36_18489: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: AHA_1941: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: ASA_2352: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Tola_0881: Pyruvate formate-lyase (EC 2.3.1.54) |
Pyruvate formate-lyase (EC 2.3.1.54) |
| pflA |
Gene: Ping_3308: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: PCNPT3_03051: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: PE36_18494: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -42 score = 4.43275 sequence = ATGTAATAAAATAACGG Gene: AHA_1689: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -42 score = 4.08832 sequence = ATGTAATAAAATCACGG Gene: ASA_2671: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Tola_0880: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| PCNPT3_03061 |
|
*
Psychromonas sp. CNPT3 Site: position = -272 score = 5.03732 sequence = CTGTAATAAAATTACAT Gene: PCNPT3_03061: flavodoxin |
|
|
|
|
flavodoxin |
| CRON 2. | |||||||
| glpT |
|
|
Gene: PE36_14104: Glycerol-3-phosphate transporter |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -151 score = 4.87607 sequence = TTGTAATAAAACTGCAA Gene: AHA_1650: Glycerol-3-phosphate transporter |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -151 score = 4.87607 sequence = TTGTAATAAAACTGCAA Gene: ASA_2708: Glycerol-3-phosphate transporter |
|
Glycerol-3-phosphate transporter |
| CRON 3. | |||||||
| aceB |
|
|
Gene: PE36_05538: Malate synthase (EC 2.3.3.9) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -314 score = 4.81917 sequence = TTGTAATTTTATTACGT Gene: AHA_2816: Malate synthase (EC 2.3.3.9) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -314 score = 4.81917 sequence = TTGTAATTTTATTACGT Gene: ASA_1515: Malate synthase (EC 2.3.3.9) |
|
Malate synthase (EC 2.3.3.9) |
| aceA |
|
|
Gene: PE36_05533: Isocitrate lyase (EC 4.1.3.1) |
Gene: AHA_2817: Isocitrate lyase (EC 4.1.3.1) |
Gene: ASA_1514: Isocitrate lyase (EC 4.1.3.1) |
|
Isocitrate lyase (EC 4.1.3.1) |
| CRON 4. | |||||||
| gltB |
|
|
*
Moritella sp. PE36 Site: position = -247 score = 3.96507 sequence = TTGTAGTTTATTGACCA Gene: PE36_04848: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -310 score = 4.35455 sequence = TGGTAAAATTACTACAA Gene: AHA_2703: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -265 score = 4.35455 sequence = TGGTAAAATTACTACAA Gene: ASA_1667: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
|
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
| gltD |
|
|
Gene: PE36_04853: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: AHA_2704: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: ASA_1666: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
|
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
| CRON 5. | |||||||
| glk |
*2
Psychromonas ingrahamii 37 Gene: Ping_2382: Glucokinase (EC 2.7.1.2) Site: position = -169 score = 4.66409 sequence = TTGGAATAAAACAACAT Site: position = -107 score = 4.66855 sequence = ATGTCATTTTATTACAA Gene: Ping_2359: Glucokinase (EC 2.7.1.2) |
*
Psychromonas sp. CNPT3 Site: position = -179 score = 4.61706 sequence = ATGAAAATAAATTACAA Site: position = -73 score = 4.14055 sequence = ACGTGGCTTTATTACAA Gene: PCNPT3_06628: Glucokinase (EC 2.7.1.2) |
|
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -331 score = 4.76516 sequence = TTGTAATTTAGCTTCAG Site: position = -148 score = 4.61544 sequence = ATGTTGCAAAGCAACAA Gene: AHA_1351: Glucokinase (EC 2.7.1.2) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -331 score = 4.76516 sequence = TTGTAATTTAGCTTCAG Site: position = -148 score = 4.61544 sequence = ATGTTGCAAAGCAACAA Gene: ASA_1323: Glucokinase (EC 2.7.1.2) |
Gene: Tola_1021: Glucokinase (EC 2.7.1.2) |
Glucokinase (EC 2.7.1.2) |
| CRON 6. | |||||||
| ackA |
*2
Psychromonas ingrahamii 37 Site: position = -132 score = 4.78144 sequence = TTGTCATTTAATTACAT Gene: Ping_3311: Acetate kinase (EC 2.7.2.1) Gene: Ping_2760: Acetate kinase (EC 2.7.2.1) |
*2
Psychromonas sp. CNPT3 Gene: PCNPT3_06298: Acetate kinase (EC 2.7.2.1) Site: position = -154 score = 5.48431 sequence = TTGTAATTTTATTACAA Site: position = -266 score = 4.66742 sequence = CTGTAACTTTATTACGA Gene: PCNPT3_03031: Acetate kinase (EC 2.7.2.1) |
Gene: PE36_18509: Acetate kinase (EC 2.7.2.1) |
*2
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -219 score = 4.72757 sequence = TTGTTATTTTTCAACAA Gene: AHA_0891: Acetate kinase (EC 2.7.2.1) Gene: AHA_3586: Acetate kinase (EC 2.7.2.1) |
*2
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -219 score = 4.72757 sequence = TTGTTATTTTTCAACAA Gene: ASA_3401: Acetate kinase (EC 2.7.2.1) Gene: ASA_3549: Acetate kinase (EC 2.7.2.1) |
2
Tolumonas auensis DSM 9187 Gene: Tola_0878: Acetate kinase (EC 2.7.2.1) Gene: Tola_1896: Acetate kinase (EC 2.7.2.1) |
Acetate kinase (EC 2.7.2.1) |
| pta |
Gene: Ping_3312: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: PCNPT3_03026: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: PE36_18514: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: AHA_0890: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: ASA_3402: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: Tola_0877: Phosphate acetyltransferase (EC 2.3.1.8) |
Phosphate acetyltransferase (EC 2.3.1.8) |
| CRON 7. | |||||||
| eno |
Gene: Ping_0669: Enolase (EC 4.2.1.11) |
Gene: PCNPT3_11773: Enolase (EC 4.2.1.11) |
Gene: PE36_23066: Enolase (EC 4.2.1.11) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -34 score = 4.40285 sequence = TTGTTGTTTTTTTACGA Gene: AHA_0821: Enolase (EC 4.2.1.11) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -34 score = 4.40285 sequence = TTGTTGTTTTTTTACGA Gene: ASA_3475: Enolase (EC 4.2.1.11) |
Gene: Tola_2742: Enolase (EC 4.2.1.11) |
Enolase (EC 4.2.1.11) |
| CRON 8. | |||||||
| ppc |
*
Psychromonas ingrahamii 37 Site: position = -30 score = 4.5244 sequence = ATGTAGTTTTATTACTA Gene: Ping_0226: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Psychromonas sp. CNPT3 Site: position = -33 score = 5.08332 sequence = ATGTAATTTTATTACAT Gene: PCNPT3_02710: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Moritella sp. PE36 Site: position = -142 score = 4.78715 sequence = TTGTAGTAAAATTACAC Gene: PE36_14831: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -205 score = 4.62677 sequence = ATGTAAGTAAGTTACAT Gene: AHA_0591: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -76 score = 4.42706 sequence = TTGTAATCACACAACAA Gene: ASA_0576: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Tola_0092: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
| CRON 9. | |||||||
| tal |
|
|
|
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -375 score = 4.42789 sequence = ACGTAATAAAATTTCAA Site: position = -85 score = 4.84653 sequence = TTGTAATTTTATTTCAG Gene: AHA_3140: Transaldolase (EC 2.2.1.2) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -387 score = 4.42789 sequence = ACGTAATAAAATTTCAA Site: position = -97 score = 4.84653 sequence = TTGTAATTTTATTTCAG Gene: ASA_1186: Transaldolase (EC 2.2.1.2) |
|
Transaldolase (EC 2.2.1.2) |
| CRON 10. | |||||||
| pntA |
Gene: Ping_0566: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
Gene: PCNPT3_11603: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
Gene: PE36_01180: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -195 score = 5.00451 sequence = TTGTAATAAAACTCCAA Gene: AHA_4080: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -195 score = 5.00451 sequence = TTGTAATAAAACTCCAA Gene: ASA_0236: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
Gene: Tola_2797: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) |
| pntB |
Gene: Ping_0565: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) |
|
Gene: PE36_01175: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) |
Gene: AHA_4079: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) |
Gene: ASA_0237: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) |
Gene: Tola_2796: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) |
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) |
| CRON 11. | |||||||
| mglB |
|
Gene: PCNPT3_12802: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
Gene: PE36_11517: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -149 score = 4.65795 sequence = TTGTTGCTATGTAACAG Gene: AHA_4100: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -149 score = 3.97323 sequence = TTATTGCTATGTAACAG Gene: ASA_0214: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
*
Tolumonas auensis DSM 9187 Site: position = -272 score = 4.73098 sequence = TTGTAATTTAACATCAG Gene: Tola_2639: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
| mglA |
|
Gene: PCNPT3_12797: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
Gene: PE36_11522: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
Gene: AHA_4099: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
Gene: ASA_0215: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
Gene: Tola_2638: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
| mglC |
|
|
|
Gene: AHA_4098: Galactoside transport system permease protein mglC (TC 3.A.1.2.3) |
Gene: ASA_0216: Galactoside transport system permease protein mglC (TC 3.A.1.2.3) |
Gene: Tola_2637: Galactoside transport system permease protein mglC (TC 3.A.1.2.3) |
Galactoside transport system permease protein mglC (TC 3.A.1.2.3) |
| CRON 12. | |||||||
| ldhA |
Gene: Ping_0091: D-lactate dehydrogenase (EC 1.1.1.28) |
Gene: PCNPT3_06176: D-lactate dehydrogenase (EC 1.1.1.28) |
|
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -39 score = 5.30818 sequence = TTGTAATTTAACTACAT Gene: AHA_4145: D-lactate dehydrogenase (EC 1.1.1.28) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -39 score = 5.30818 sequence = TTGTAATTTAACTACAT Gene: ASA_0168: D-lactate dehydrogenase (EC 1.1.1.28) |
*
Tolumonas auensis DSM 9187 Site: position = -38 score = 4.58666 sequence = GTGTAATTTTACTACAT Gene: Tola_1538: D-lactate dehydrogenase (EC 1.1.1.28) |
D-lactate dehydrogenase (EC 1.1.1.28) |
| CRON 13. | |||||||
| gapA |
*
Psychromonas ingrahamii 37 Site: position = -203 score = 4.98856 sequence = GTGTAATTTAATTACAA Gene: Ping_2367: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
*
Psychromonas sp. CNPT3 Site: position = -188 score = 5.15021 sequence = CTGTAATTAAATTACAT Gene: PCNPT3_06598: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
|
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -58 score = 4.32269 sequence = TTCTAGTAAATTTACAA Gene: AHA_3618: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -58 score = 4.32269 sequence = TTCTAGTAAATTTACAA Gene: ASA_0759: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: Tola_2698: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
| aldE |
|
|
|
Gene: AHA_3619: Aldose 1-epimerase |
Gene: ASA_0758: Aldose 1-epimerase |
Gene: Tola_2699: Aldose 1-epimerase |
Aldose 1-epimerase |
| CRON 14. | |||||||
| mtlA |
*2
Psychromonas ingrahamii 37 Site: position = -403 score = 4.62918 sequence = GTGTAATAAAATTACAG Gene: Ping_0088: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Site: position = -402 score = 4.67518 sequence = GTGTAATAAAATTACAT Gene: Ping_0985: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
|
|
Gene: AHA_0551: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -221 score = 4.39657 sequence = ATGTAGCCAAACTACAG Gene: ASA_3757: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
Gene: Tola_0283: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
| mtlD |
Gene: Ping_0089: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
|
|
Gene: AHA_0550: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
Gene: ASA_3756: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
Gene: Tola_0284: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
| mtlR |
2
Psychromonas ingrahamii 37 Gene: Ping_0984: Mannitol operon repressor Gene: Ping_0090: Mannitol operon repressor |
|
|
Gene: AHA_0549: Mannitol operon repressor |
Gene: ASA_3755: Mannitol operon repressor |
Gene: Tola_0285: Mannitol operon repressor |
Mannitol operon repressor |
| CRON 15. | |||||||
| grcA |
*
Psychromonas ingrahamii 37 Site: position = -48 score = 5.17807 sequence = TTGTAACTTTATTACAT Gene: Ping_1282: Autonomous glycyl radical cofactor |
|
|
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -289 score = 4.63729 sequence = ATGTAGTTAAATTACTA Gene: AHA_3143: Autonomous glycyl radical cofactor |
Gene: ASA_1181: Autonomous glycyl radical cofactor |
*
Tolumonas auensis DSM 9187 Site: position = -269 score = 5.00742 sequence = TTGTAGTAAATTTACAA Gene: Tola_0894: Autonomous glycyl radical cofactor |
Autonomous glycyl radical cofactor |
| CRON 16. | |||||||
| adhE |
Gene: Ping_3315: Alcohol dehydrogenase (EC 1.1.1.1) |
*
Psychromonas sp. CNPT3 Site: position = -160 score = 5.02776 sequence = TTGTAACTTACTTACAA Gene: PCNPT3_03011: Alcohol dehydrogenase (EC 1.1.1.1) |
*
Moritella sp. PE36 Site: position = -207 score = 5.09303 sequence = TTGAAATAAAATTACAA Site: position = -135 score = 4.61776 sequence = ACGTAATATTACTACAA Gene: PE36_02809: Alcohol dehydrogenase (EC 1.1.1.1) |
|
|
|
Alcohol dehydrogenase (EC 1.1.1.1) |
| CRON 17. | |||||||
| tpiA |
*
Psychromonas ingrahamii 37 Site: position = -31 score = 4.65966 sequence = TTTTAATTTTATAACAA Gene: Ping_2199: Triosephosphate isomerase (EC 5.3.1.1) |
*
Psychromonas sp. CNPT3 Site: position = -99 score = 5.08332 sequence = ATGTAATTTTATTACAT Gene: PCNPT3_08035: Triosephosphate isomerase (EC 5.3.1.1) |
*
Moritella sp. PE36 Site: position = -175 score = 4.65532 sequence = ATGTAGTTTTATTACCA Gene: PE36_07906: Triosephosphate isomerase (EC 5.3.1.1) |
2
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_3309: Triosephosphate isomerase (EC 5.3.1.1) Gene: AHA_2382: Triosephosphate isomerase (EC 5.3.1.1) |
2
Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_1004: Triosephosphate isomerase (EC 5.3.1.1) Gene: ASA_2232: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: Tola_1458: Triosephosphate isomerase (EC 5.3.1.1) |
Triosephosphate isomerase (EC 5.3.1.1) |
| CRON 18. | |||||||
| ptsH |
*
Psychromonas ingrahamii 37 Site: position = -46 score = 4.11957 sequence = AGGTGATAAAATAACAA Gene: Ping_2439: Phosphocarrier protein of PTS system |
Gene: PCNPT3_08555: Phosphocarrier protein of PTS system |
*
Moritella sp. PE36 Site: position = -201 score = 5.50868 sequence = TTGTAATTAAACTACAA Gene: PE36_18600: Phosphocarrier protein of PTS system |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -97 score = 4.34506 sequence = TCGTTACTTTACAACAT Gene: AHA_3039: Phosphocarrier protein of PTS system |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -97 score = 4.34506 sequence = TCGTTACTTTACAACAT Gene: ASA_3060: Phosphocarrier protein of PTS system |
*
Tolumonas auensis DSM 9187 Site: position = -104 score = 4.23185 sequence = TCGTTGTCATACTACAA Gene: Tola_0626: Phosphocarrier protein of PTS system |
Phosphocarrier protein of PTS system |
| ptsI |
Gene: Ping_2440: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: PCNPT3_08565: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: PE36_18605: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: AHA_3040: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: ASA_3061: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Tola_0625: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
| crr |
Gene: Ping_2441: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: PCNPT3_08575: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: PE36_18610: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: AHA_3041: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: ASA_3062: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: Tola_0624: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
PTS system, glucose-specific IIA component (EC 2.7.1.69) |
| CRON 19. | |||||||
| hexR |
*
Psychromonas ingrahamii 37 Site: position = -140 score = 4.66409 sequence = ATGTTGTTTTATTCCAA Site: position = -202 score = 4.66855 sequence = TTGTAATAAAATGACAT Gene: Ping_2360: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Psychromonas sp. CNPT3 Site: position = -118 score = 4.61706 sequence = TTGTAATTTATTTTCAT Gene: PCNPT3_06623: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*2
Moritella sp. PE36 Gene: PE36_04663: Central carbohydrate metabolism transcription regulator HexR, RpiR family Site: position = -195 score = 4.18307 sequence = CCGTAATAAAGTCACAA Gene: PE36_04653: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -209 score = 4.61544 sequence = TTGTTGCTTTGCAACAT Site: position = -26 score = 4.76516 sequence = CTGAAGCTAAATTACAA Gene: AHA_1350: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -215 score = 4.61544 sequence = TTGTTGCTTTGCAACAT Site: position = -32 score = 4.76516 sequence = CTGAAGCTAAATTACAA Gene: ASA_1322: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
Gene: Tola_1020: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
Central carbohydrate metabolism transcription regulator HexR, RpiR family |
| pykA |
Gene: Ping_2361: Pyruvate kinase (EC 2.7.1.40) |
Gene: PCNPT3_06618: Pyruvate kinase (EC 2.7.1.40) |
Gene: PE36_04668: Pyruvate kinase (EC 2.7.1.40) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -111 score = 5.35153 sequence = TTGTAATTTAGTAACAA Gene: AHA_1349: Pyruvate kinase (EC 2.7.1.40) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -110 score = 5.10504 sequence = TTGTAATTTAGTAACAG Gene: ASA_1321: Pyruvate kinase (EC 2.7.1.40) |
*
Tolumonas auensis DSM 9187 Site: position = -113 score = 4.21474 sequence = CTGTAATGTTCCTACAA Gene: Tola_1019: Pyruvate kinase (EC 2.7.1.40) |
Pyruvate kinase (EC 2.7.1.40) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |