Statistics of regulated genes

Genome	Genes	Operons
Trichodesmium erythraeum IMS101
Cyanothece sp. ATCC 51142	3	3
Cyanothece sp. PCC 8801
Nostoc sp. PCC 7120
Microcystis aeruginosa NIES-843
Synechocystis sp. PCC 6803	2	2
Synechococcus sp. PCC 7002	3	2
Cyanothece sp. PCC 7425	3	3
Prochlorococcus marinus str. MIT 9313
Thermosynechococcus elongatus BP-1
Synechococcus elongatus PCC 7942	4	3
Synechococcus sp. WH 8102
Synechococcus sp. JA-3-3Ab
Gloeobacter violaceus PCC 7421	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes															Function
CRON 1.
rub	Trichodesmium erythraeum IMS101	Cyanothece sp. ATCC 51142	Cyanothece sp. PCC 8801 Gene: PCC8801_1511: Predicted rubrerythrin	Nostoc sp. PCC 7120 Gene: alr1174: Predicted rubrerythrin	Microcystis aeruginosa NIES-843	Synechocystis sp. PCC 6803	Synechococcus sp. PCC 7002	Cyanothece sp. PCC 7425	Prochlorococcus marinus str. MIT 9313 Gene: PMT2166: Predicted rubrerythrin	Thermosynechococcus elongatus BP-1	* Synechococcus elongatus PCC 7942 Site: position = -45 score = 5.151 sequence = TAAGACTTATTCTTA Gene: Synpcc7942_1649: Predicted rubrerythrin	Synechococcus sp. WH 8102 Gene: SYNW2369: Predicted rubrerythrin	Synechococcus sp. JA-3-3Ab	* Gloeobacter violaceus PCC 7421 Site: position = -62 score = 4.41876 sequence = ATAGAACGATTCTTA Site: position = -45 score = 4.63516 sequence = TAAGACTTGTTCTAG Gene: glr3734: Predicted rubrerythrin	Predicted rubrerythrin
CRON 2.
isiA	Trichodesmium erythraeum IMS101 Gene: Tery_1667: Iron stress-induced chlorophyll-binding protein	Cyanothece sp. ATCC 51142 Gene: cce_1785: Iron stress-induced chlorophyll-binding protein	Cyanothece sp. PCC 8801	Nostoc sp. PCC 7120 Gene: all4001: Iron stress-induced chlorophyll-binding protein	Microcystis aeruginosa NIES-843	Synechocystis sp. PCC 6803 Gene: sll0247: Iron stress-induced chlorophyll-binding protein	* Synechococcus sp. PCC 7002 Site: position = -273 score = 4.89173 sequence = TGAGAATAATTGTAG Gene: SYNPCC7002_A1292: Iron stress-induced chlorophyll-binding protein	* Cyanothece sp. PCC 7425 Site: position = -95 score = 4.85737 sequence = TGAGAAAGATTCTGA Gene: Cyan7425_2434: Iron stress-induced chlorophyll-binding protein	Prochlorococcus marinus str. MIT 9313	Thermosynechococcus elongatus BP-1 Gene: null: Iron stress-induced chlorophyll-binding protein	* Synechococcus elongatus PCC 7942 Site: position = -43 score = 5.22286 sequence = TGAGAATTATTGTAA Gene: Synpcc7942_1542: Iron stress-induced chlorophyll-binding protein	Synechococcus sp. WH 8102	Synechococcus sp. JA-3-3Ab	Gloeobacter violaceus PCC 7421	Iron stress-induced chlorophyll-binding protein
isiB	Trichodesmium erythraeum IMS101 Gene: Tery_1666: Flavodoxin	* Cyanothece sp. ATCC 51142 Site: position = -64 score = 5.70454 sequence = TGAGAATTATTCTAA Gene: cce_3031: Flavodoxin	Cyanothece sp. PCC 8801	Nostoc sp. PCC 7120 Gene: alr2405: Flavodoxin	Microcystis aeruginosa NIES-843	Synechocystis sp. PCC 6803 Gene: sll0248: Flavodoxin	Synechococcus sp. PCC 7002 Gene: SYNPCC7002_A1291: Flavodoxin	Cyanothece sp. PCC 7425	Prochlorococcus marinus str. MIT 9313	Thermosynechococcus elongatus BP-1	Synechococcus elongatus PCC 7942 Gene: Synpcc7942_1541: Flavodoxin	Synechococcus sp. WH 8102	Synechococcus sp. JA-3-3Ab Gene: CYA_2605: Flavodoxin	2 Gloeobacter violaceus PCC 7421 Gene: gvip027: Flavodoxin Gene: gvip026: Flavodoxin	Flavodoxin
CRON 3.
perR	Trichodesmium erythraeum IMS101	* Cyanothece sp. ATCC 51142 Site: position = -134 score = 5.55179 sequence = TCAGAATAATTCTTA Gene: cce_3127: Peroxide stress response transcriptional regulator, Fur family	Cyanothece sp. PCC 8801	Nostoc sp. PCC 7120	Microcystis aeruginosa NIES-843	* Synechocystis sp. PCC 6803 Site: position = -233 score = 5.29997 sequence = TCAGAATAGTTCTGA Site: position = -181 score = 4.76793 sequence = TTATAATTATTCTAT Gene: slr1738: Peroxide stress response transcriptional regulator, Fur family	Synechococcus sp. PCC 7002 Gene: SYNPCC7002_A1836: Peroxide stress response transcriptional regulator, Fur family	* Cyanothece sp. PCC 7425 Site: position = -138 score = 5.20207 sequence = CCAGAATAATTCTGA Site: position = -86 score = 5.21115 sequence = TGAGAATTATACTAA Gene: Cyan7425_1597: Peroxide stress response transcriptional regulator, Fur family	Prochlorococcus marinus str. MIT 9313	Thermosynechococcus elongatus BP-1	* Synechococcus elongatus PCC 7942 Site: position = -119 score = 5.05841 sequence = TAAGAATAAGTCTTA Gene: Synpcc7942_1648: Peroxide stress response transcriptional regulator, Fur family	Synechococcus sp. WH 8102	Synechococcus sp. JA-3-3Ab	* Gloeobacter violaceus PCC 7421 Site: position = -56 score = 4.85764 sequence = TTAGATCTATTCTAA Gene: glr3733: Peroxide stress response transcriptional regulator, Fur family	Peroxide stress response transcriptional regulator, Fur family
CRON 4.
ahpC	Trichodesmium erythraeum IMS101 Gene: Tery_0162: Peroxiredoxin	* Cyanothece sp. ATCC 51142 Site: position = -63 score = 5.75852 sequence = TAAGAATTATTCTGA Gene: cce_3126: Peroxiredoxin	Cyanothece sp. PCC 8801 Gene: PCC8801_0474: Peroxiredoxin	Nostoc sp. PCC 7120 Gene: all1541: Peroxiredoxin	Microcystis aeruginosa NIES-843 Gene: MAE_62780: Peroxiredoxin	* Synechocystis sp. PCC 6803 Site: position = -144 score = 4.72516 sequence = ATAGAATAATTATAA Site: position = -92 score = 5.3933 sequence = TCAGAACTATTCTGA Gene: sll1621: Peroxiredoxin	* Synechococcus sp. PCC 7002 Site: position = -79 score = 5.50828 sequence = TAAGAATTATTCTGG Gene: SYNPCC7002_A0793: Peroxiredoxin	* Cyanothece sp. PCC 7425 Site: position = -138 score = 4.81945 sequence = TTAGTATAATTCTCA Site: position = -86 score = 5.50828 sequence = TCAGAATTATTCTGG Gene: Cyan7425_1596: Peroxiredoxin	Prochlorococcus marinus str. MIT 9313 Gene: PMT1186: Peroxiredoxin	Thermosynechococcus elongatus BP-1	Synechococcus elongatus PCC 7942	Synechococcus sp. WH 8102	Synechococcus sp. JA-3-3Ab	Gloeobacter violaceus PCC 7421	Peroxiredoxin

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