Regulog YczG - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Utilization of aromatic compounds |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - ArsR
- By pathway - Utilization of aromatic compounds
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 3 | 2 |
| Bacillus amyloliquefaciens FZB42 | 3 | 2 |
| Bacillus pumilus SAFR-032 | ||
| Bacillus licheniformis DSM 13 | 3 | 2 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | 2 | 2 |
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| ycnE |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -50 score = 6.23808 sequence = GTTCGATGAAATTCGAAC Gene: BSU03870: Putative monooxygenase |
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Bacillus amyloliquefaciens FZB42 Site: position = -51 score = 6.48895 sequence = GTTCGATAATATTCGAAC Gene: RBAM_004120: Putative monooxygenase |
Gene: BPUM_3581: Putative monooxygenase |
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Bacillus licheniformis DSM 13 Site: position = -86 score = 6.57733 sequence = GTTCGAAGATTTTCGAAC Gene: BLi00471: Putative monooxygenase |
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Gene: BC3023: Putative monooxygenase |
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Putative monooxygenase |
| nfrA2 |
Gene: BSU03860: NAD(P)H-dependent nitro/flavin reductase |
Gene: RBAM_004110: NAD(P)H-dependent nitro/flavin reductase |
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Gene: BLi00470: NAD(P)H-dependent nitro/flavin reductase |
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Gene: BH2953: NAD(P)H-dependent nitro/flavin reductase |
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NAD(P)H-dependent nitro/flavin reductase |
| CRON 2. | ||||||||||||
| BC1999 |
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Bacillus cereus ATCC 14579 Site: position = -42 score = 6.64368 sequence = GTTCGAATATATTCGAAC Gene: BC1999: Uncharacterized oxidoreductase |
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Uncharacterized oxidoreductase |
| CRON 3. | ||||||||||||
| yczG |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -107 score = 6.23808 sequence = GTTCGAATTTCATCGAAC Gene: BSU03880: Transcriptional regulator, ArsR family |
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Bacillus amyloliquefaciens FZB42 Site: position = -108 score = 6.48895 sequence = GTTCGAATATTATCGAAC Gene: RBAM_004130: Transcriptional regulator, ArsR family |
Gene: BPUM_0360: Transcriptional regulator, ArsR family |
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Bacillus licheniformis DSM 13 Site: position = -109 score = 6.57733 sequence = GTTCGAAAATCTTCGAAC Gene: BLi00472: Transcriptional regulator, ArsR family |
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Bacillus cereus ATCC 14579 Site: position = -82 score = 6.64368 sequence = GTTCGAATATATTCGAAC Gene: BC1998: Transcriptional regulator, ArsR family |
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Transcriptional regulator, ArsR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |