Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog IolR2 - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Inositol utilization
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426 5 1
Bacillus cereus ATCC 14579
Bacillus halodurans C-125 10 2
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
iolB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39750: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036770: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04250: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1889: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -45
score = 6.43928
sequence = AATGAAATCGATTACAAT

Gene: BH2320: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus clausii KSM-K16

Gene: ABC0423: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1953: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
5-deoxy-glucuronate isomerase (EC 5.3.1.-)
iolC
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39740: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036760: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04249: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2319: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
5-keto-2-deoxygluconokinase (EC 2.7.1.92)
iolD
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39730: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036750: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04248: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1891: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2318: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus clausii KSM-K16

Gene: ABC0425: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1948: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
iolE
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39720: Inosose dehydratase (EC 4.2.1.44)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036740: Inosose dehydratase (EC 4.2.1.44)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04247: Inosose dehydratase (EC 4.2.1.44)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2317: Inosose dehydratase (EC 4.2.1.44)
 
Bacillus clausii KSM-K16

Gene: ABC0426: Inosose dehydratase (EC 4.2.1.44)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Inosose dehydratase (EC 4.2.1.44)
iolG
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39700: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036720: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04245: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2316: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
 
Bacillus clausii KSM-K16

Gene: ABC0427: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
iolI
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39680: Inosose isomerase (EC 5.3.99.-)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036700: Inosose isomerase (EC 5.3.99.-)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04243: Inosose isomerase (EC 5.3.99.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1892: Inosose isomerase (EC 5.3.99.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2315: Inosose isomerase (EC 5.3.99.-)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Inosose isomerase (EC 5.3.99.-)
iolJ
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39670: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036690: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04242: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1886: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2314: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus clausii KSM-K16

Gene: ABC0428: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
CRON 2.
iolR2
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -37
score = 6.34656
sequence = TATGTAATCGATTACATA

Gene: GK2115: Transcriptional regulator of inositol utilization
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2313: Transcriptional regulator of inositol utilization
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional regulator of inositol utilization
GK2114
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -92
score = 5.61104
sequence = GATGTAATCGATTACATC

Gene: GK2114: Predicted inositol derivative dehydrogenase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 2
Paenibacillus sp. JDR-2

Gene: Pjdr2_5008: Predicted inositol derivative dehydrogenase

Gene: Pjdr2_2539: Predicted inositol derivative dehydrogenase
Predicted inositol derivative dehydrogenase
BH1247
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK2113: Hypotetical protein
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1247: Hypotetical protein
 
Bacillus clausii KSM-K16

Gene: ABC1573: Hypotetical protein
 
Oceanobacillus iheyensis HTE831

Gene: OB2566: Hypotetical protein
 2
Paenibacillus sp. JDR-2

Gene: Pjdr2_4862: Hypotetical protein

Gene: Pjdr2_5588: Hypotetical protein
Hypotetical protein
GK2112
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK2112: Predicted inositol derivative dehydrogenase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Predicted inositol derivative dehydrogenase
BH1249
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK2111: Predicted inosose isomerase (EC 5.3.99.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1249: Predicted inosose isomerase (EC 5.3.99.-)
 
Bacillus clausii KSM-K16

Gene: ABC0795: Predicted inosose isomerase (EC 5.3.99.-)
 
Oceanobacillus iheyensis HTE831

Gene: OB2563: Predicted inosose isomerase (EC 5.3.99.-)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5725: Predicted inosose isomerase (EC 5.3.99.-)
Predicted inosose isomerase (EC 5.3.99.-)
 
CRON 3.
iolA
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1887: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -86
score = 6.56016
sequence = AATGAAATCGATTTCAAT

Gene: BH2312: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1951: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
yxlH
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU38640: Probable inositol derivative MFS-type transporter
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04110: Probable inositol derivative MFS-type transporter
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1885: Probable inositol derivative MFS-type transporter
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2311: Probable inositol derivative MFS-type transporter
 
Bacillus clausii KSM-K16

Gene: ABC3967: Probable inositol derivative MFS-type transporter
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3363: Probable inositol derivative MFS-type transporter
Probable inositol derivative MFS-type transporter
iolH
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2310: Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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