Regulog IolR1 - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Inositol utilization |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - LacI
- By pathway - Inositol utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 2 | 2 |
| Bacillus amyloliquefaciens FZB42 | ||
| Bacillus pumilus SAFR-032 | ||
| Bacillus licheniformis DSM 13 | 1 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | 13 | 2 |
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | 6 | 2 |
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 | 7 | 1 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| BH2322 |
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Geobacillus kaustophilus HTA426 Site: position = -208 score = 5.31641 sequence = GGAAAGCGCTTGCC Gene: GK1894: Inositol transport system ATP-binding protein |
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Gene: BH2322: Inositol transport system ATP-binding protein |
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Inositol transport system ATP-binding protein |
| BH2321 |
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Gene: GK1893: Inositol transport system permease protein |
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Gene: BH2321: Inositol transport system permease protein |
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Inositol transport system permease protein |
| iolI |
Gene: BSU39680: Inosose isomerase (EC 5.3.99.-) |
Gene: RBAM_036700: Inosose isomerase (EC 5.3.99.-) |
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Gene: BLi04243: Inosose isomerase (EC 5.3.99.-) |
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Gene: GK1892: Inosose isomerase (EC 5.3.99.-) |
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Gene: BH2315: Inosose isomerase (EC 5.3.99.-) |
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Inosose isomerase (EC 5.3.99.-) |
| iolD |
Gene: BSU39730: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
Gene: RBAM_036750: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: BLi04248: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: GK1891: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: BH2318: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
Gene: ABC0425: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Paenibacillus sp. JDR-2 Site: position = -108 score = 4.97551 sequence = GTTAAGCGCTTAAC Gene: Pjdr2_1948: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
| iolE |
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Gene: GK1890: Inosose dehydratase (EC 4.2.1.44) |
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Gene: Pjdr2_1949: Inosose dehydratase (EC 4.2.1.44) |
Inosose dehydratase (EC 4.2.1.44) |
| iolB |
Gene: BSU39750: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
Gene: RBAM_036770: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: BLi04250: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: GK1889: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: BH2320: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
Gene: ABC0423: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: Pjdr2_1953: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
| iolC |
Gene: BSU39740: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
Gene: RBAM_036760: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: BLi04249: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: GK1888: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: BH2319: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
Gene: ABC0424: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: Pjdr2_1950: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
| iolA |
Gene: BSU39760: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
Gene: RBAM_036780: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Gene: BLi04251: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Gene: GK1887: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Gene: BH2312: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
Gene: ABC0422: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Gene: Pjdr2_1951: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
| iolJ |
Gene: BSU39670: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
Gene: RBAM_036690: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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Gene: BLi04242: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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Gene: GK1886: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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Gene: BH2314: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
Gene: ABC0428: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
| yrbE |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -38 score = 4.63434 sequence = ATAAAGCGCTTTCG Gene: BSU27770: Predicted inositol derivative dehydrogenase |
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Gene: BH2221: Predicted inositol derivative dehydrogenase |
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Gene: Pjdr2_1952: Predicted inositol derivative dehydrogenase |
Predicted inositol derivative dehydrogenase |
| iolR1 |
Gene: BSU10840: Transcriptional regulator of inositol utilization, LacI family |
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Gene: BLi01180: Transcriptional regulator of inositol utilization, LacI family |
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Gene: GK1901: Transcriptional regulator of inositol utilization, LacI family |
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Gene: BH2219: Transcriptional regulator of inositol utilization, LacI family |
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Gene: Pjdr2_1954: Transcriptional regulator of inositol utilization, LacI family |
Transcriptional regulator of inositol utilization, LacI family |
| BH2222 |
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Gene: BLi02212: Na+:myo-inositol cotransporter |
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Bacillus halodurans C-125 Site: position = -118 score = 5.3419 sequence = GGAAAGCGCTTACT Site: position = -39 score = 4.97551 sequence = GTTAAGCGCTTAAC Gene: BH2222: Na+:myo-inositol cotransporter |
Gene: ABC0430: Na+:myo-inositol cotransporter |
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Na+:myo-inositol cotransporter |
| BH0710 |
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Gene: GK1898: Predicted inositol derivative dehydrogenase |
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Gene: BH2220: Predicted inositol derivative dehydrogenase |
Gene: ABC0577: Predicted inositol derivative dehydrogenase |
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Gene: Pjdr2_1117: Predicted inositol derivative dehydrogenase |
Predicted inositol derivative dehydrogenase |
| BC4668 |
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Geobacillus kaustophilus HTA426 Site: position = -44 score = 4.88717 sequence = AGAAAGCGCTTCCC Site: position = -129 score = 5.14294 sequence = GGAAAGCGCTTGCT Gene: GK1899: Predicted inositol derivative dehydrogenase |
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Predicted inositol derivative dehydrogenase |
| iolX |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -112 score = 4.54116 sequence = AGAAAGCGCTTGCG Site: position = -53 score = 5.01559 sequence = AGAAAACGCTTTCT Gene: BSU10850: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-) |
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Bacillus licheniformis DSM 13 Site: position = -59 score = 4.96947 sequence = AGCAAGCGCTTTCT Site: position = -137 score = 4.61934 sequence = AGCAAGCGCTTGAC Site: position = -38 score = 4.63434 sequence = ATAAAGCGCTTTCA Gene: BLi01181: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-) |
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Gene: GK1897: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-) |
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Gene: ABC0429: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-) |
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Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-) |
| BH3901 |
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Gene: GK1896: Inositol transport system sugar-binding protein |
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Bacillus halodurans C-125 Site: position = -127 score = 5.12669 sequence = AGAAAGCGCTTAAC Gene: BH3901: Inositol transport system sugar-binding protein |
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Inositol transport system sugar-binding protein |
| BH3900 |
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Gene: BH3900: Methyl-accepting chemotaxis protein |
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Methyl-accepting chemotaxis protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |