Regulog CitT - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | CitB |
| Regulation mode: | activator |
| Biological process: | Citrate utilization |
| Effector: | Citrate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - CitB
- By effector - Citrate
- By pathway - Citrate utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 1 | 1 |
| Bacillus amyloliquefaciens FZB42 | 1 | 1 |
| Bacillus pumilus SAFR-032 | 1 | 1 |
| Bacillus licheniformis DSM 13 | 1 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | 1 | 1 |
| Bacillus halodurans C-125 | 1 | 1 |
| Bacillus clausii KSM-K16 | 1 | 1 |
| Oceanobacillus iheyensis HTE831 | 3 | 1 |
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| tctC |
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Gene: BLi01241: Predicted citrate transport protein TctC |
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Gene: ABC1013: Predicted citrate transport protein TctC |
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Oceanobacillus iheyensis HTE831 Site: position = -118 score = 4.7201 sequence = TGAACAAAAAGAACAAAA Gene: OB3249: Predicted citrate transport protein TctC |
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Predicted citrate transport protein TctC |
| tctA |
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Gene: BLi01242: Predicted citrate transport protein TctB |
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Gene: ABC1014: Predicted citrate transport protein TctB |
Gene: OB3248: Predicted citrate transport protein TctB |
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Predicted citrate transport protein TctB |
| tctA |
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Gene: BLi01243: Predicted citrate transport membrane protein TctA |
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Gene: ABC1015: Predicted citrate transport membrane protein TctA |
Gene: OB3247: Predicted citrate transport membrane protein TctA |
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Predicted citrate transport membrane protein TctA |
| CRON 2. | ||||||||||||
| citH |
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Bacillus cereus ATCC 14579 Site: position = -156 score = 4.7201 sequence = TGAACAAAATGAACAAAA Gene: BC0562: Ca2+/citrate complex secondary transporter |
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Ca2+/citrate complex secondary transporter |
| CRON 3. | ||||||||||||
| citM |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -158 score = 4.46318 sequence = TGATCAAAAAGAACAAAA Gene: BSU07610: Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
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Bacillus amyloliquefaciens FZB42 Site: position = -154 score = 4.7201 sequence = TGAACAAAATGAACGAAA Gene: RBAM_007810: Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
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Bacillus pumilus SAFR-032 Site: position = -153 score = 4.7201 sequence = TGAACAAAATGAACAAAA Gene: BPUM_0710: Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
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Bacillus licheniformis DSM 13 Site: position = -158 score = 3.96821 sequence = TGGTCAAAAAGAACAAAA Gene: BLi00221: Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
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Bacillus halodurans C-125 Site: position = -163 score = 4.7201 sequence = TGAACAAAATAAACAAAA Gene: BH0745: Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
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Bacillus clausii KSM-K16 Site: position = -114 score = 4.22513 sequence = TGGACAAAATAAAAAAAA Gene: ABC0100: Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
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Mg(2+) Citrate transporter (TC 2.A.11.1.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |