Regulog UctR - Thermotogales

Properties
Regulator type:	Transcription factor
Regulator family:	RpiR
Regulation mode:	repressor
Biological process:	Sugar utilization
Effector:
Phylum:	Thermotogae
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - RpiR
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Thermotoga maritima MSB8	5	1
Thermotoga sp. RQ2	6	1
Thermotoga neapolitana DSM 4359	6	1
Thermotoga petrophila RKU-1	6	1
Thermotoga naphthophila RKU-10	3	1
Thermotoga lettingae TMO
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1
Petrotoga mobilis SJ95
Thermotogales bacterium TBF 19.5.1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
uctP	* Thermotoga maritima MSB8 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTAAC Gene: TM0322: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP	* Thermotoga sp. RQ2 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTACC Gene: TRQ2_0611: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP	* Thermotoga neapolitana DSM 4359 Site: position = -31 score = 6.22933 sequence = GAAAAAAATATTTTTACA Gene: CTN_0346: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP	* Thermotoga petrophila RKU-1 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTACC Gene: Tpet_0597: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP	* Thermotoga naphthophila RKU-10 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTAAC Gene: Tnap_0961: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP
uctM	Thermotoga maritima MSB8	Thermotoga sp. RQ2 Gene: TRQ2_0610: Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM	Thermotoga neapolitana DSM 4359 Gene: CTN_0345: Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM	Thermotoga petrophila RKU-1 Gene: Tpet_0596: Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM
uctQ	Thermotoga maritima MSB8 Gene: TM0324: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ	Thermotoga sp. RQ2 Gene: TRQ2_0609: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ	Thermotoga neapolitana DSM 4359 Gene: CTN_0344: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ	Thermotoga petrophila RKU-1 Gene: Tpet_0595: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ
TM0325	Thermotoga maritima MSB8 Gene: TM0325: Predicted sugar dehydrogenase TM0325	Thermotoga sp. RQ2 Gene: TRQ2_0608: Predicted sugar dehydrogenase TM0325	Thermotoga neapolitana DSM 4359 Gene: CTN_0343: Predicted sugar dehydrogenase TM0325	Thermotoga petrophila RKU-1 Gene: Tpet_0594: Predicted sugar dehydrogenase TM0325	Thermotoga naphthophila RKU-10	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Predicted sugar dehydrogenase TM0325
uctR	Thermotoga maritima MSB8 Gene: TM0326: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR	Thermotoga sp. RQ2 Gene: TRQ2_0607: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR	Thermotoga neapolitana DSM 4359 Gene: CTN_0342: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR	Thermotoga petrophila RKU-1 Gene: Tpet_0593: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR	Thermotoga naphthophila RKU-10 Gene: Tnap_0962: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	Unknown carbohydrate utilization transcriptional regulator UctR, RpiR
TM0327	Thermotoga maritima MSB8 Gene: TM0327: phosphoglycerate dehydrogenase TM0327, putative	Thermotoga sp. RQ2 Gene: TRQ2_0606: phosphoglycerate dehydrogenase TM0327, putative	Thermotoga neapolitana DSM 4359 Gene: CTN_0341: phosphoglycerate dehydrogenase TM0327, putative	Thermotoga petrophila RKU-1 Gene: Tpet_0592: phosphoglycerate dehydrogenase TM0327, putative	Thermotoga naphthophila RKU-10 Gene: Tnap_0963: phosphoglycerate dehydrogenase TM0327, putative	Thermotoga lettingae TMO	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	phosphoglycerate dehydrogenase TM0327, putative

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog UctR - Thermotogales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --