Regulog UctR - Thermotogales
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Thermotogae |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By TF family - RpiR
- By pathway - Sugar utilization
| Genome | Genes | Operons |
|---|---|---|
| Thermotoga maritima MSB8 | 5 | 1 |
| Thermotoga sp. RQ2 | 6 | 1 |
| Thermotoga neapolitana DSM 4359 | 6 | 1 |
| Thermotoga petrophila RKU-1 | 6 | 1 |
| Thermotoga naphthophila RKU-10 | 3 | 1 |
| Thermotoga lettingae TMO | ||
| Thermosipho africanus TCF52B | ||
| Thermosipho melanesiensis BI429 | ||
| Fervidobacterium nodosum Rt17-B1 | ||
| Petrotoga mobilis SJ95 | ||
| Thermotogales bacterium TBF 19.5.1 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| uctP |
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Thermotoga maritima MSB8 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTAAC Gene: TM0322: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP |
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Thermotoga sp. RQ2 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTACC Gene: TRQ2_0611: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP |
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Thermotoga neapolitana DSM 4359 Site: position = -31 score = 6.22933 sequence = GAAAAAAATATTTTTACA Gene: CTN_0346: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP |
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Thermotoga petrophila RKU-1 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTACC Gene: Tpet_0597: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP |
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Thermotoga naphthophila RKU-10 Site: position = -34 score = 6.54629 sequence = GAAAAAAATATTTTTAAC Gene: Tnap_0961: Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP |
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Unknown carbohydrate transporter from TRAP family, substrate-binding component UctP |
| uctM |
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Gene: TRQ2_0610: Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM |
Gene: CTN_0345: Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM |
Gene: Tpet_0596: Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM |
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Unknown carbohydrate transporter from TRAP family, small transmembrane component UctM |
| uctQ |
Gene: TM0324: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ |
Gene: TRQ2_0609: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ |
Gene: CTN_0344: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ |
Gene: Tpet_0595: Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ |
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Unknown carbohydrate transporter from TRAP family, large transmembrane component UctQ |
| TM0325 |
Gene: TM0325: Predicted sugar dehydrogenase TM0325 |
Gene: TRQ2_0608: Predicted sugar dehydrogenase TM0325 |
Gene: CTN_0343: Predicted sugar dehydrogenase TM0325 |
Gene: Tpet_0594: Predicted sugar dehydrogenase TM0325 |
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Predicted sugar dehydrogenase TM0325 |
| uctR |
Gene: TM0326: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR |
Gene: TRQ2_0607: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR |
Gene: CTN_0342: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR |
Gene: Tpet_0593: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR |
Gene: Tnap_0962: Unknown carbohydrate utilization transcriptional regulator UctR, RpiR |
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Unknown carbohydrate utilization transcriptional regulator UctR, RpiR |
| TM0327 |
Gene: TM0327: phosphoglycerate dehydrogenase TM0327, putative |
Gene: TRQ2_0606: phosphoglycerate dehydrogenase TM0327, putative |
Gene: CTN_0341: phosphoglycerate dehydrogenase TM0327, putative |
Gene: Tpet_0592: phosphoglycerate dehydrogenase TM0327, putative |
Gene: Tnap_0963: phosphoglycerate dehydrogenase TM0327, putative |
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phosphoglycerate dehydrogenase TM0327, putative |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |