Regulog UgtR - Thermotogales

Properties
Regulator type:	Transcription factor
Regulator family:	RpiR
Regulation mode:	repressor
Biological process:	Sugar utilization
Effector:
Phylum:	Thermotogae
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - RpiR
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Thermotoga maritima MSB8	8	1
Thermotoga sp. RQ2	8	1
Thermotoga neapolitana DSM 4359	8	1
Thermotoga petrophila RKU-1	8	1
Thermotoga naphthophila RKU-10	8	1
Thermotoga lettingae TMO	8	1
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1
Petrotoga mobilis SJ95	5	1
Thermotogales bacterium TBF 19.5.1	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ugtE	* Thermotoga maritima MSB8 Site: position = -80 score = 6.19769 sequence = GTAGAAAATTTTCTAT Gene: TM1235: hypothetical sugar ABC transporter, solute-binding protein UgtE	* Thermotoga sp. RQ2 Site: position = -59 score = 6.19769 sequence = GTAGAAAATTTTCTAT Gene: TRQ2_1583: hypothetical sugar ABC transporter, solute-binding protein UgtE	* Thermotoga neapolitana DSM 4359 Site: position = -50 score = 6.1095 sequence = GTAGAAAATTTTCTtT Gene: CTN_1337: hypothetical sugar ABC transporter, solute-binding protein UgtE	* Thermotoga petrophila RKU-1 Site: position = -29 score = 6.19769 sequence = GTAGAAAATTTTCTAT Gene: Tpet_1534: hypothetical sugar ABC transporter, solute-binding protein UgtE	* Thermotoga naphthophila RKU-10 Site: position = -59 score = 6.19769 sequence = GTAGAAAATTTTCTAT Gene: Tnap_1557: hypothetical sugar ABC transporter, solute-binding protein UgtE	* Thermotoga lettingae TMO Site: position = -65 score = 5.71119 sequence = GTAGAAAATTTTCctT Gene: Tlet_0089: hypothetical sugar ABC transporter, solute-binding protein UgtE	Thermosipho africanus TCF52B Gene: THA_1985: hypothetical sugar ABC transporter, solute-binding protein UgtE	Thermosipho melanesiensis BI429 Gene: Tmel_1713: hypothetical sugar ABC transporter, solute-binding protein UgtE	Fervidobacterium nodosum Rt17-B1	* Petrotoga mobilis SJ95 Site: position = -79 score = 5.62301 sequence = AacGAAAATTTTCTtT Gene: Pmob_0074: hypothetical sugar ABC transporter, solute-binding protein UgtE	* Thermotogales bacterium TBF 19.5.1 Site: position = -73 score = 5.19917 sequence = GatGAAAATaTTCTtC Gene: Kole_0811: hypothetical sugar ABC transporter, solute-binding protein UgtE	hypothetical sugar ABC transporter, solute-binding protein UgtE
ugtF	Thermotoga maritima MSB8 Gene: TM1234: hypothetical sugar ABC transporter, membrane protein UgtF	Thermotoga sp. RQ2 Gene: TRQ2_1584: hypothetical sugar ABC transporter, membrane protein UgtF	Thermotoga neapolitana DSM 4359 Gene: CTN_1338: hypothetical sugar ABC transporter, membrane protein UgtF	Thermotoga petrophila RKU-1 Gene: Tpet_1535: hypothetical sugar ABC transporter, membrane protein UgtF	Thermotoga naphthophila RKU-10 Gene: Tnap_1558: hypothetical sugar ABC transporter, membrane protein UgtF	Thermotoga lettingae TMO Gene: Tlet_0088: hypothetical sugar ABC transporter, membrane protein UgtF	Thermosipho africanus TCF52B Gene: THA_1986: hypothetical sugar ABC transporter, membrane protein UgtF	Thermosipho melanesiensis BI429 Gene: Tmel_1714: hypothetical sugar ABC transporter, membrane protein UgtF	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0073: hypothetical sugar ABC transporter, membrane protein UgtF	Thermotogales bacterium TBF 19.5.1 Gene: Kole_0812: hypothetical sugar ABC transporter, membrane protein UgtF	hypothetical sugar ABC transporter, membrane protein UgtF
ugtG	Thermotoga maritima MSB8 Gene: TM1233: hypothetical sugar ABC transporter, membrane protein UgtG	Thermotoga sp. RQ2 Gene: TRQ2_1585: hypothetical sugar ABC transporter, membrane protein UgtG	Thermotoga neapolitana DSM 4359 Gene: CTN_1339: hypothetical sugar ABC transporter, membrane protein UgtG	Thermotoga petrophila RKU-1 Gene: Tpet_1536: hypothetical sugar ABC transporter, membrane protein UgtG	Thermotoga naphthophila RKU-10 Gene: Tnap_1559: hypothetical sugar ABC transporter, membrane protein UgtG	Thermotoga lettingae TMO Gene: Tlet_0087: hypothetical sugar ABC transporter, membrane protein UgtG	Thermosipho africanus TCF52B Gene: THA_1987: hypothetical sugar ABC transporter, membrane protein UgtG	Thermosipho melanesiensis BI429 Gene: Tmel_1715: hypothetical sugar ABC transporter, membrane protein UgtG	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0072: hypothetical sugar ABC transporter, membrane protein UgtG	Thermotogales bacterium TBF 19.5.1 Gene: Kole_0813: hypothetical sugar ABC transporter, membrane protein UgtG	hypothetical sugar ABC transporter, membrane protein UgtG
ugtK	Thermotoga maritima MSB8 Gene: TM1232: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermotoga sp. RQ2 Gene: TRQ2_1586: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermotoga neapolitana DSM 4359 Gene: CTN_1340: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermotoga petrophila RKU-1 Gene: Tpet_1537: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermotoga naphthophila RKU-10 Gene: Tnap_1560: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermotoga lettingae TMO Gene: Tlet_0086: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermosipho africanus TCF52B Gene: THA_1988: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Thermosipho melanesiensis BI429 Gene: Tmel_1716: hypothetical sugar ABC transporter, ATP-binding protein UgtK	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	hypothetical sugar ABC transporter, ATP-binding protein UgtK
TM1231	Thermotoga maritima MSB8 Gene: TM1231: alpha-mannosidase-related protein, family 38	Thermotoga sp. RQ2 Gene: TRQ2_1587: alpha-mannosidase-related protein, family 38	Thermotoga neapolitana DSM 4359 Gene: CTN_1341: alpha-mannosidase-related protein, family 38	Thermotoga petrophila RKU-1 Gene: Tpet_1538: alpha-mannosidase-related protein, family 38	Thermotoga naphthophila RKU-10 Gene: Tnap_1561: alpha-mannosidase-related protein, family 38	Thermotoga lettingae TMO Gene: Tlet_0085: alpha-mannosidase-related protein, family 38	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	alpha-mannosidase-related protein, family 38
TM1230	Thermotoga maritima MSB8 Gene: TM1230: glycosyl transferase group 1	Thermotoga sp. RQ2 Gene: TRQ2_1588: glycosyl transferase group 1	Thermotoga neapolitana DSM 4359 Gene: CTN_1342: glycosyl transferase group 1	Thermotoga petrophila RKU-1 Gene: Tpet_1539: glycosyl transferase group 1	Thermotoga naphthophila RKU-10 Gene: Tnap_1562: glycosyl transferase group 1	Thermotoga lettingae TMO Gene: Tlet_0082: glycosyl transferase group 1	Thermosipho africanus TCF52B Gene: THA_1989: glycosyl transferase group 1	Thermosipho melanesiensis BI429 Gene: Tmel_1717: glycosyl transferase group 1	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95	Thermotogales bacterium TBF 19.5.1	glycosyl transferase group 1
TM1229	Thermotoga maritima MSB8 Gene: TM1229: glycosyl transferase family 2	Thermotoga sp. RQ2 Gene: TRQ2_1589: glycosyl transferase family 2	Thermotoga neapolitana DSM 4359 Gene: CTN_1343: glycosyl transferase family 2	Thermotoga petrophila RKU-1 Gene: Tpet_1540: glycosyl transferase family 2	Thermotoga naphthophila RKU-10 Gene: Tnap_1563: glycosyl transferase family 2	Thermotoga lettingae TMO Gene: Tlet_0084: glycosyl transferase family 2	Thermosipho africanus TCF52B	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0071: glycosyl transferase family 2	Thermotogales bacterium TBF 19.5.1 Gene: Kole_0814: glycosyl transferase family 2	glycosyl transferase family 2
ugtR	Thermotoga maritima MSB8 Gene: TM1228: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermotoga sp. RQ2 Gene: TRQ2_1590: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermotoga neapolitana DSM 4359 Gene: CTN_1344: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermotoga petrophila RKU-1 Gene: Tpet_1541: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermotoga naphthophila RKU-10 Gene: Tnap_1564: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermotoga lettingae TMO Gene: Tlet_0083: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermosipho africanus TCF52B Gene: THA_1990: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermosipho melanesiensis BI429	Fervidobacterium nodosum Rt17-B1	Petrotoga mobilis SJ95 Gene: Pmob_0070: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	Thermotogales bacterium TBF 19.5.1 Gene: Kole_0815: predicted sugar catabolic transcriptional regulator UgtR, RpiR family	predicted sugar catabolic transcriptional regulator UgtR, RpiR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog UgtR - Thermotogales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --