Regulog DesR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | repressor |
| Biological process: | Cold shock response |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - LuxR
- By pathway - Cold shock response
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 3 | 1 |
| Bacillus amyloliquefaciens FZB42 | 3 | 1 |
| Bacillus pumilus SAFR-032 | 3 | 1 |
| Bacillus licheniformis DSM 13 | 3 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | 3 | 1 |
| Oceanobacillus iheyensis HTE831 | 1 | 1 |
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| des |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -99 score = 7.855 sequence = ATGACAA-(0)-ATGTCAT Gene: BSU19180: Fatty-acid desaturase (EC 1.14.99.-) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -101 score = 7.855 sequence = ATGACAA-(0)-ATGTCAT Gene: RBAM_036870: Fatty-acid desaturase (EC 1.14.99.-) |
*
Bacillus pumilus SAFR-032 Site: position = -102 score = 7.855 sequence = ATGACAA-(0)-ATGTCAT Gene: BPUM_2588: Fatty-acid desaturase (EC 1.14.99.-) |
*
Bacillus licheniformis DSM 13 Site: position = -102 score = 7.55858 sequence = ATGACAA-(0)-GTGTCAT Gene: BLi02807: Fatty-acid desaturase (EC 1.14.99.-) |
|
|
|
|
*
Bacillus clausii KSM-K16 Site: position = -98 score = 7.02844 sequence = ATGACAT-(0)-TTGTCAT Gene: ABC0734: Fatty-acid desaturase (EC 1.14.99.-) |
*
Oceanobacillus iheyensis HTE831 Site: position = -99 score = 7.855 sequence = ATGACAA-(0)-ATGTCAT Gene: OB2852: Fatty-acid desaturase (EC 1.14.99.-) |
|
Fatty-acid desaturase (EC 1.14.99.-) |
| desK |
Gene: BSU19190: Two-component sensor histidine kinase |
Gene: RBAM_036860: Two-component sensor histidine kinase |
Gene: BPUM_2589: Two-component sensor histidine kinase |
Gene: BLi02808: Two-component sensor histidine kinase |
|
|
|
|
Gene: ABC0735: Two-component sensor histidine kinase |
Gene: OB2851: Two-component sensor histidine kinase |
|
Two-component sensor histidine kinase |
| desR |
Gene: BSU19200: Two-component response regulator of cold shock, OmpR family |
Gene: RBAM_036850: Two-component response regulator of cold shock, OmpR family |
Gene: BPUM_2590: Two-component response regulator of cold shock, OmpR family |
Gene: BLi02809: Two-component response regulator of cold shock, OmpR family |
|
|
|
|
Gene: ABC0736: Two-component response regulator of cold shock, OmpR family |
Gene: OB2850: Two-component response regulator of cold shock, OmpR family |
|
Two-component response regulator of cold shock, OmpR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |