Regulog AdaA - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | DNA alkylation response |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - AraC
- By pathway - DNA alkylation response
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 3 | 2 |
| Bacillus amyloliquefaciens FZB42 | 3 | 1 |
| Bacillus pumilus SAFR-032 | ||
| Bacillus licheniformis DSM 13 | 2 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | 4 | 2 |
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | 3 | 2 |
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 | 4 | 2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| adaA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -187 score = 8.29641 sequence = TTTGTTAT-(0)-CTTGCTAT Gene: BSU01810: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
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Bacillus amyloliquefaciens FZB42 Site: position = -80 score = 7.45699 sequence = TTTGTTAT-(0)-CTTGCTCC Gene: RBAM_037970: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
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Bacillus licheniformis DSM 13 Site: position = -82 score = 6.89608 sequence = TTTGTCTT-(0)-CTTGCTGT Gene: BLi02836: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
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Bacillus cereus ATCC 14579 Site: position = -80 score = 7.49017 sequence = TTTGTAAT-(0)-CTTGCTCT Gene: BC3740: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
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Bacillus clausii KSM-K16 Site: position = -137 score = 8.29641 sequence = TTTGTTAT-(0)-CTTGCTAT Gene: ABC3153: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
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Paenibacillus sp. JDR-2 Site: position = -83 score = 1.67582 sequence = TTTcGtaA-(0)-TCTTGCgc Gene: Pjdr2_5363: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family |
| adaB |
Gene: BSU01820: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
Gene: RBAM_037960: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
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Gene: BLi02837: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
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Gene: BC3741: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
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Gene: ABC3154: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
Gene: OB0736: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
Gene: Pjdr2_5364: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) |
| alkA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -97 score = -1.51398 sequence = AGCAAGAT-(0)-AACAAAAT Gene: BSU01800: DNA-3-methyladenine glycosylase II (EC 3.2.2.21) |
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Gene: BC3742: DNA-3-methyladenine glycosylase II (EC 3.2.2.21) |
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Bacillus clausii KSM-K16 Site: position = -99 score = -1.51398 sequence = AGCAAGAT-(0)-AACAAAAT Gene: ABC3152: DNA-3-methyladenine glycosylase II (EC 3.2.2.21) |
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Paenibacillus sp. JDR-2 Site: position = -84 score = -1.75007 sequence = gcGCAAGA-(0)-TtaCgAAA Gene: Pjdr2_5362: DNA-3-methyladenine glycosylase II (EC 3.2.2.21) |
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) |
| exoA |
Gene: BSU40880: Exodeoxyribonuclease III (EC 3.1.11.2) |
Gene: RBAM_037950: Exodeoxyribonuclease III (EC 3.1.11.2) |
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Bacillus cereus ATCC 14579 Site: position = -57 score = 6.51849 sequence = TTTTCTAT-(0)-TTTGTGAT Gene: BC3739: Exodeoxyribonuclease III (EC 3.1.11.2) |
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Gene: ABC1955: Exodeoxyribonuclease III (EC 3.1.11.2) |
Gene: OB0511: Exodeoxyribonuclease III (EC 3.1.11.2) |
Gene: Pjdr2_0753: Exodeoxyribonuclease III (EC 3.1.11.2) |
Exodeoxyribonuclease III (EC 3.1.11.2) |
| Pjdr2_5361 |
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Gene: Pjdr2_5361: Short-chain dehydrogenase/reductase |
Short-chain dehydrogenase/reductase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |