Statistics of regulated genes

Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	3	2
Bacillus amyloliquefaciens FZB42	3	1
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13	2	1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579	4	2
Bacillus halodurans C-125
Bacillus clausii KSM-K16	3	2
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2	4	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes												Function
CRON 1.
adaA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -187 score = 8.29641 sequence = TTTGTTAT-(0)-CTTGCTAT Gene: BSU01810: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family	* Bacillus amyloliquefaciens FZB42 Site: position = -80 score = 7.45699 sequence = TTTGTTAT-(0)-CTTGCTCC Gene: RBAM_037970: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -82 score = 6.89608 sequence = TTTGTCTT-(0)-CTTGCTGT Gene: BLi02836: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -80 score = 7.49017 sequence = TTTGTAAT-(0)-CTTGCTCT Gene: BC3740: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family	Bacillus halodurans C-125	* Bacillus clausii KSM-K16 Site: position = -137 score = 8.29641 sequence = TTTGTTAT-(0)-CTTGCTAT Gene: ABC3153: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -83 score = 1.67582 sequence = TTTcGtaA-(0)-TCTTGCgc Gene: Pjdr2_5363: Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family	Methylphosphotriester-DNA alkyltransferase / Transcriptional regulator of adaptative response to DNA alkylation, AraC/XylS family
adaB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01820: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_037960: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi02837: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3741: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3154: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Oceanobacillus iheyensis HTE831 Gene: OB0736: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Paenibacillus sp. JDR-2 Gene: Pjdr2_5364: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
alkA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -97 score = -1.51398 sequence = AGCAAGAT-(0)-AACAAAAT Gene: BSU01800: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3742: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	Bacillus halodurans C-125	* Bacillus clausii KSM-K16 Site: position = -99 score = -1.51398 sequence = AGCAAGAT-(0)-AACAAAAT Gene: ABC3152: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -84 score = -1.75007 sequence = gcGCAAGA-(0)-TtaCgAAA Gene: Pjdr2_5362: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
exoA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU40880: Exodeoxyribonuclease III (EC 3.1.11.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_037950: Exodeoxyribonuclease III (EC 3.1.11.2)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -57 score = 6.51849 sequence = TTTTCTAT-(0)-TTTGTGAT Gene: BC3739: Exodeoxyribonuclease III (EC 3.1.11.2)	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1955: Exodeoxyribonuclease III (EC 3.1.11.2)	Oceanobacillus iheyensis HTE831 Gene: OB0511: Exodeoxyribonuclease III (EC 3.1.11.2)	Paenibacillus sp. JDR-2 Gene: Pjdr2_0753: Exodeoxyribonuclease III (EC 3.1.11.2)	Exodeoxyribonuclease III (EC 3.1.11.2)
Pjdr2_5361	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5361: Short-chain dehydrogenase/reductase	Short-chain dehydrogenase/reductase

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