Regulog AbgR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | p-aminobenzoyl-glutamate utilization |
| Effector: | p-aminobenzoyl-glutamate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - LysR
- By effector - p-aminobenzoyl-glutamate
- By pathway - p-aminobenzoyl-glutamate utilization
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 5 | 2 |
| Salmonella typhimurium LT2 | ||
| Citrobacter koseri ATCC BAA-895 | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 4 | 2 |
| Enterobacter sp. 638 | ||
| Erwinia amylovora ATCC 49946 | ||
| Yersinia pestis KIM | ||
| Serratia proteamaculans 568 | 4 | 2 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ||
| Edwardsiella tarda EIB202 | ||
| Proteus mirabilis HI4320 | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | 4 | 2 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| abgA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -62 score = 5.09097 sequence = GATAAGTAAAAACTATC Site: position = -166 score = 5.60516 sequence = GATAACCGTTATTTATC Gene: b1338: aminobenzoyl-glutamate utilization protein A |
|
|
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -62 score = 5.31671 sequence = GATAAACAAAAGCTATC Site: position = -157 score = 5.5377 sequence = GATAACCGTTGCTTATC Gene: KPN_01534: aminobenzoyl-glutamate utilization protein A |
|
|
|
*
Serratia proteamaculans 568 Site: position = -260 score = 5.60516 sequence = GATAACCGTTGTTTATC Gene: Spro_4200: aminobenzoyl-glutamate utilization protein A |
|
|
|
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -261 score = 5.12886 sequence = GATAACTTTTAATTATA Gene: plu3726: aminobenzoyl-glutamate utilization protein A |
aminobenzoyl-glutamate utilization protein A |
| abgB |
Gene: b1337: aminobenzoyl-glutamate utilization protein B |
|
|
Gene: KPN_01533: aminobenzoyl-glutamate utilization protein B |
|
|
|
Gene: Spro_4201: aminobenzoyl-glutamate utilization protein B |
|
|
|
Gene: plu3725: aminobenzoyl-glutamate utilization protein B |
aminobenzoyl-glutamate utilization protein B |
| abgT |
Gene: b1336: aminobenzoyl-glutamate transport protein |
|
|
Gene: KPN_01532: aminobenzoyl-glutamate transport protein |
|
|
|
Gene: Spro_4202: aminobenzoyl-glutamate transport protein |
|
|
|
Gene: plu3724: aminobenzoyl-glutamate transport protein |
aminobenzoyl-glutamate transport protein |
| ogt |
Gene: b1335: O-6-alkylguanine-DNA:cysteine-protein methyltransferase |
|
|
|
|
|
|
|
|
|
|
|
O-6-alkylguanine-DNA:cysteine-protein methyltransferase |
| CRON 2. | |||||||||||||
| abgR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -130 score = 5.09097 sequence = GATAGTTTTTACTTATC Site: position = -26 score = 5.60516 sequence = GATAAATAACGGTTATC Gene: b1339: transcriptional regulator AbgR |
|
|
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -121 score = 5.31671 sequence = GATAGCTTTTGTTTATC Site: position = -26 score = 5.5377 sequence = GATAAGCAACGGTTATC Gene: KPN_01535: transcriptional regulator AbgR |
|
|
|
*
Serratia proteamaculans 568 Site: position = -28 score = 5.60516 sequence = GATAAACAACGGTTATC Gene: Spro_4199: transcriptional regulator AbgR |
|
|
|
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -30 score = 5.12886 sequence = TATAATTAAAAGTTATC Gene: plu3727: transcriptional regulator AbgR |
transcriptional regulator AbgR |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |