Regulog HexR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - HexR
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 3 | 3 |
| Salmonella typhimurium LT2 | 4 | 4 |
| Citrobacter koseri ATCC BAA-895 | 4 | 4 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 4 | 4 |
| Enterobacter sp. 638 | 4 | 4 |
| Erwinia amylovora ATCC 49946 | ||
| Yersinia pestis KIM | 3 | 3 |
| Serratia proteamaculans 568 | 5 | 4 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 5 | 4 |
| Edwardsiella tarda EIB202 | 6 | 3 |
| Proteus mirabilis HI4320 | 4 | 4 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 3 | 3 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| pckA |
Gene: b3403: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
*
Salmonella typhimurium LT2 Site: position = -258 score = 5.13742 sequence = ACGTAACTTTCTTACAT Gene: STM3500: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -258 score = 4.93418 sequence = TCGTAAATTTCTTACAT Gene: CKO_04825: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
*2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02285: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Site: position = -259 score = 4.86646 sequence = ACGTAATTTAATTTCAG Gene: KPN_03773: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
*
Enterobacter sp. 638 Site: position = -258 score = 5.13742 sequence = ACGTAACTTTCTTACAT Gene: Ent638_3816: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Gene: EAM_3251: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Gene: y3918: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
2
Serratia proteamaculans 568 Gene: Spro_2098: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Gene: Spro_4617: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Gene: ECA4106: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Gene: ETAE_3277: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Gene: PMI3015: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Gene: plu0100: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
| CRON 2. | |||||||||||||
| ybfA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -164 score = 5.56252 sequence = GTGTAACTTAATTACAG Gene: b0699: Putative exported protein |
*
Salmonella typhimurium LT2 Site: position = -187 score = 4.8494 sequence = TTGTAACTAATTTACGC Gene: STM0708: Putative exported protein |
*
Citrobacter koseri ATCC BAA-895 Site: position = -61 score = 5.66561 sequence = ATGTAACTTAATTACAG Gene: CKO_02461: Putative exported protein |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -159 score = 4.62024 sequence = TCGTAACTAATTTACGT Gene: KPN_00718: Putative exported protein |
*
Enterobacter sp. 638 Site: position = -161 score = 5.39666 sequence = TCGTAACTTAATTACAG Gene: Ent638_1211: Putative exported protein |
Gene: EAM_1158: Putative exported protein |
*
Yersinia pestis KIM Site: position = -60 score = 5.03022 sequence = ACGTAACAAAATTACGA Gene: y1267: Putative exported protein |
*
Serratia proteamaculans 568 Site: position = -188 score = 5.19608 sequence = GTGTAACAAAATTACGT Gene: Spro_1250: Putative exported protein |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -176 score = 4.75214 sequence = TTGTAACTTAATGACGT Gene: ECA1344: Putative exported protein |
Gene: ETAE_2599: Putative exported protein |
*
Proteus mirabilis HI4320 Site: position = -130 score = 4.99253 sequence = GTGAAATTTAATTACAC Gene: PMI0555: Putative exported protein |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -165 score = 5.80904 sequence = ATGTAATAAAATTACAT Gene: plu1423: Putative exported protein |
Putative exported protein |
| CRON 3. | |||||||||||||
| hexR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -290 score = 5.37835 sequence = TTGTAATTTTCTTACGG Gene: b1853: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Salmonella typhimurium LT2 Site: position = -296 score = 5.76925 sequence = TTGTAATTTTATTACAC Gene: STM1887: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Citrobacter koseri ATCC BAA-895 Site: position = -311 score = 5.93565 sequence = TTGTAATTTTATTACAA Gene: CKO_01111: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -292 score = 5.60751 sequence = TTGTAATTTTCTTACAC Gene: KPN_02368: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Enterobacter sp. 638 Site: position = -312 score = 5.93565 sequence = TTGTAATTTTATTACAA Gene: Ent638_2422: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
|
*
Yersinia pestis KIM Site: position = -328 score = 5.7106 sequence = TTGTAATTTTCTTACAT Site: position = -194 score = 4.83226 sequence = ATGTAATTTTATGACGT Gene: y2245: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Serratia proteamaculans 568 Site: position = -328 score = 5.7106 sequence = TTGTAATTTTCTTACAT Gene: Spro_2769: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -29 score = 4.6219 sequence = TTGGAAAAAACTTACAT Gene: ECA2480: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Edwardsiella tarda EIB202 Site: position = -329 score = 5.42817 sequence = TTGTAATTTTTTTACAG Gene: ETAE_1448: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Proteus mirabilis HI4320 Site: position = -330 score = 5.69472 sequence = TTGTAATTTTGTTACAT Gene: PMI1156: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -321 score = 5.69472 sequence = TTGTAATTTTGTTACAG Gene: plu2121: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
Central carbohydrate metabolism transcription regulator HexR, RpiR family |
| CRON 4. | |||||||||||||
| zwf |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -64 score = 5.37835 sequence = CCGTAAGAAAATTACAA Gene: b1852: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Salmonella typhimurium LT2 Site: position = -62 score = 5.76925 sequence = GTGTAATAAAATTACAA Gene: STM1886: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -63 score = 5.93565 sequence = TTGTAATAAAATTACAA Gene: CKO_01113: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -62 score = 5.60751 sequence = GTGTAAGAAAATTACAA Gene: KPN_02367: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Enterobacter sp. 638 Site: position = -63 score = 5.93565 sequence = TTGTAATAAAATTACAA Gene: Ent638_2421: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
Gene: EAM_1995: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Yersinia pestis KIM Site: position = -50 score = 5.7106 sequence = ATGTAAGAAAATTACAA Site: position = -184 score = 4.83226 sequence = ACGTCATAAAATTACAT Gene: y2244: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Serratia proteamaculans 568 Site: position = -41 score = 5.7106 sequence = ATGTAAGAAAATTACAA Gene: Spro_2768: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -40 score = 5.80904 sequence = CTGTAATAAAATTACAG Gene: ECA2479: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Edwardsiella tarda EIB202 Site: position = -40 score = 5.42817 sequence = CTGTAAAAAAATTACAA Gene: ETAE_1449: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Proteus mirabilis HI4320 Site: position = -41 score = 5.69472 sequence = ATGTAACAAAATTACAA Gene: PMI1157: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -40 score = 5.69472 sequence = CTGTAACAAAATTACAA Gene: plu2122: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
| pgl |
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Gene: ETAE_1450: 6-phosphogluconolactonase |
|
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6-phosphogluconolactonase |
| edd |
Gene: b1851: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: STM1885: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: CKO_01115: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: KPN_02366: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: Ent638_2420: Phosphogluconate dehydratase (EC 4.2.1.12) |
|
Gene: y1654: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: Spro_4499: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: ECA1836: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: ETAE_1451: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: PMI2760: Phosphogluconate dehydratase (EC 4.2.1.12) |
|
Phosphogluconate dehydratase (EC 4.2.1.12) |
| eda |
Gene: b1850: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: STM1884: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: CKO_01116: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: KPN_02365: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: Ent638_2419: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
|
Gene: y2243: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
2
Serratia proteamaculans 568 Gene: Spro_2767: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) Gene: Spro_4500: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: ECA2478: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: ETAE_1452: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: PMI2761: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
|
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
| CRON 5. | |||||||||||||
| ppc |
Gene: b3956: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: STM4119: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: CKO_03038: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: KPN_04245: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Ent638_4030: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: EAM_0136: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: y0308: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Serratia proteamaculans 568 Site: position = -51 score = 4.99718 sequence = GTGAAATTTACTTACAA Site: position = -166 score = 4.76337 sequence = GCGTAATTAAATTTCAG Gene: Spro_4783: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -174 score = 5.15892 sequence = TTGTAATTAAATTTCAC Site: position = -43 score = 4.96299 sequence = GTGAAATAAACTTACAA Gene: ECA0187: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Edwardsiella tarda EIB202 Site: position = -151 score = 4.76337 sequence = GCGTAATTAAATTTCAG Gene: ETAE_3484: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Proteus mirabilis HI4320 Site: position = -205 score = 4.86646 sequence = CCGTAATTAAATTTCAG Site: position = -89 score = 4.65144 sequence = ATGAAAATTAATTACAC Gene: PMI3227: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: plu4746: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |