Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog HexR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 45 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 3 3
Salmonella typhimurium LT2 4 4
Citrobacter koseri ATCC BAA-895 4 4
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 4 4
Enterobacter sp. 638 4 4
Erwinia amylovora ATCC 49946
Yersinia pestis KIM 3 3
Serratia proteamaculans 568 5 4
Erwinia carotovora subsp. atroseptica SCRI1043 5 4
Edwardsiella tarda EIB202 6 3
Proteus mirabilis HI4320 4 4
Photorhabdus luminescens subsp. laumondii TTO1 3 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pckA
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3403: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Salmonella typhimurium LT2

Site:
position = -258
score = 5.13742
sequence = ACGTAACTTTCTTACAT

Gene: STM3500: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -258
score = 4.93418
sequence = TCGTAAATTTCTTACAT

Gene: CKO_04825: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_02285: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)

Site:
position = -259
score = 4.86646
sequence = ACGTAATTTAATTTCAG

Gene: KPN_03773: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Enterobacter sp. 638

Site:
position = -258
score = 5.13742
sequence = ACGTAACTTTCTTACAT

Gene: Ent638_3816: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Erwinia amylovora ATCC 49946

Gene: EAM_3251: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Yersinia pestis KIM

Gene: y3918: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 2
Serratia proteamaculans 568

Gene: Spro_2098: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)

Gene: Spro_4617: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA4106: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Edwardsiella tarda EIB202

Gene: ETAE_3277: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Proteus mirabilis HI4320

Gene: PMI3015: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0100: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
CRON 2.
ybfA
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -164
score = 5.56252
sequence = GTGTAACTTAATTACAG

Gene: b0699: Putative exported protein
*
Salmonella typhimurium LT2

Site:
position = -187
score = 4.8494
sequence = TTGTAACTAATTTACGC

Gene: STM0708: Putative exported protein
*
Citrobacter koseri ATCC BAA-895

Site:
position = -61
score = 5.66561
sequence = ATGTAACTTAATTACAG

Gene: CKO_02461: Putative exported protein
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -159
score = 4.62024
sequence = TCGTAACTAATTTACGT

Gene: KPN_00718: Putative exported protein
*
Enterobacter sp. 638

Site:
position = -161
score = 5.39666
sequence = TCGTAACTTAATTACAG

Gene: Ent638_1211: Putative exported protein
 
Erwinia amylovora ATCC 49946

Gene: EAM_1158: Putative exported protein
*
Yersinia pestis KIM

Site:
position = -60
score = 5.03022
sequence = ACGTAACAAAATTACGA

Gene: y1267: Putative exported protein
*
Serratia proteamaculans 568

Site:
position = -188
score = 5.19608
sequence = GTGTAACAAAATTACGT

Gene: Spro_1250: Putative exported protein
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -176
score = 4.75214
sequence = TTGTAACTTAATGACGT

Gene: ECA1344: Putative exported protein
 
Edwardsiella tarda EIB202

Gene: ETAE_2599: Putative exported protein
*
Proteus mirabilis HI4320

Site:
position = -130
score = 4.99253
sequence = GTGAAATTTAATTACAC

Gene: PMI0555: Putative exported protein
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -165
score = 5.80904
sequence = ATGTAATAAAATTACAT

Gene: plu1423: Putative exported protein
Putative exported protein
 
CRON 3.
hexR
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -290
score = 5.37835
sequence = TTGTAATTTTCTTACGG

Gene: b1853: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Salmonella typhimurium LT2

Site:
position = -296
score = 5.76925
sequence = TTGTAATTTTATTACAC

Gene: STM1887: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Citrobacter koseri ATCC BAA-895

Site:
position = -311
score = 5.93565
sequence = TTGTAATTTTATTACAA

Gene: CKO_01111: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -292
score = 5.60751
sequence = TTGTAATTTTCTTACAC

Gene: KPN_02368: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Enterobacter sp. 638

Site:
position = -312
score = 5.93565
sequence = TTGTAATTTTATTACAA

Gene: Ent638_2422: Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
Erwinia amylovora ATCC 49946
*
Yersinia pestis KIM

Site:
position = -328
score = 5.7106
sequence = TTGTAATTTTCTTACAT

Site:
position = -194
score = 4.83226
sequence = ATGTAATTTTATGACGT

Gene: y2245: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Serratia proteamaculans 568

Site:
position = -328
score = 5.7106
sequence = TTGTAATTTTCTTACAT

Gene: Spro_2769: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -29
score = 4.6219
sequence = TTGGAAAAAACTTACAT

Gene: ECA2480: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Edwardsiella tarda EIB202

Site:
position = -329
score = 5.42817
sequence = TTGTAATTTTTTTACAG

Gene: ETAE_1448: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Proteus mirabilis HI4320

Site:
position = -330
score = 5.69472
sequence = TTGTAATTTTGTTACAT

Gene: PMI1156: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -321
score = 5.69472
sequence = TTGTAATTTTGTTACAG

Gene: plu2121: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
CRON 4.
zwf
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -64
score = 5.37835
sequence = CCGTAAGAAAATTACAA

Gene: b1852: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Salmonella typhimurium LT2

Site:
position = -62
score = 5.76925
sequence = GTGTAATAAAATTACAA

Gene: STM1886: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -63
score = 5.93565
sequence = TTGTAATAAAATTACAA

Gene: CKO_01113: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -62
score = 5.60751
sequence = GTGTAAGAAAATTACAA

Gene: KPN_02367: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Enterobacter sp. 638

Site:
position = -63
score = 5.93565
sequence = TTGTAATAAAATTACAA

Gene: Ent638_2421: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Erwinia amylovora ATCC 49946

Gene: EAM_1995: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Yersinia pestis KIM

Site:
position = -50
score = 5.7106
sequence = ATGTAAGAAAATTACAA

Site:
position = -184
score = 4.83226
sequence = ACGTCATAAAATTACAT

Gene: y2244: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Serratia proteamaculans 568

Site:
position = -41
score = 5.7106
sequence = ATGTAAGAAAATTACAA

Gene: Spro_2768: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -40
score = 5.80904
sequence = CTGTAATAAAATTACAG

Gene: ECA2479: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Edwardsiella tarda EIB202

Site:
position = -40
score = 5.42817
sequence = CTGTAAAAAAATTACAA

Gene: ETAE_1449: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Proteus mirabilis HI4320

Site:
position = -41
score = 5.69472
sequence = ATGTAACAAAATTACAA

Gene: PMI1157: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -40
score = 5.69472
sequence = CTGTAACAAAATTACAA

Gene: plu2122: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202

Gene: ETAE_1450: 6-phosphogluconolactonase
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
6-phosphogluconolactonase
edd
 
Escherichia coli str. K-12 substr. MG1655

Gene: b1851: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Salmonella typhimurium LT2

Gene: STM1885: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_01115: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_02366: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Enterobacter sp. 638

Gene: Ent638_2420: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y1654: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Serratia proteamaculans 568

Gene: Spro_4499: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA1836: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Edwardsiella tarda EIB202

Gene: ETAE_1451: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Proteus mirabilis HI4320

Gene: PMI2760: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Photorhabdus luminescens subsp. laumondii TTO1
Phosphogluconate dehydratase (EC 4.2.1.12)
eda
 
Escherichia coli str. K-12 substr. MG1655

Gene: b1850: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Salmonella typhimurium LT2

Gene: STM1884: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_01116: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_02365: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Enterobacter sp. 638

Gene: Ent638_2419: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y2243: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 2
Serratia proteamaculans 568

Gene: Spro_2767: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

Gene: Spro_4500: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA2478: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Edwardsiella tarda EIB202

Gene: ETAE_1452: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Proteus mirabilis HI4320

Gene: PMI2761: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Photorhabdus luminescens subsp. laumondii TTO1
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
CRON 5.
ppc
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3956: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Salmonella typhimurium LT2

Gene: STM4119: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03038: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04245: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Enterobacter sp. 638

Gene: Ent638_4030: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Erwinia amylovora ATCC 49946

Gene: EAM_0136: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Yersinia pestis KIM

Gene: y0308: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
*
Serratia proteamaculans 568

Site:
position = -51
score = 4.99718
sequence = GTGAAATTTACTTACAA

Site:
position = -166
score = 4.76337
sequence = GCGTAATTAAATTTCAG

Gene: Spro_4783: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -174
score = 5.15892
sequence = TTGTAATTAAATTTCAC

Site:
position = -43
score = 4.96299
sequence = GTGAAATAAACTTACAA

Gene: ECA0187: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
*
Edwardsiella tarda EIB202

Site:
position = -151
score = 4.76337
sequence = GCGTAATTAAATTTCAG

Gene: ETAE_3484: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
*
Proteus mirabilis HI4320

Site:
position = -205
score = 4.86646
sequence = CCGTAATTAAATTTCAG

Site:
position = -89
score = 4.65144
sequence = ATGAAAATTAATTACAC

Gene: PMI3227: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu4746: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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