Regulog DgoR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galactonate utilization |
| Effector: | Galactonate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - GntR/Others
- By effector - Galactonate
- By pathway - Galactonate utilization
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 5 | 1 |
| Salmonella typhimurium LT2 | 4 | 1 |
| Citrobacter koseri ATCC BAA-895 | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 5 | 1 |
| Enterobacter sp. 638 | 5 | 1 |
| Erwinia amylovora ATCC 49946 | ||
| Yersinia pestis KIM | ||
| Serratia proteamaculans 568 | 6 | 2 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 5 | 1 |
| Edwardsiella tarda EIB202 | ||
| Proteus mirabilis HI4320 | ||
| Photorhabdus luminescens subsp. laumondii TTO1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| Spro_0710 |
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Serratia proteamaculans 568 Site: position = -118 score = 3.63876 sequence = TTGTATTACCT Site: position = -140 score = 4.75763 sequence = TTGTATTACAA Gene: Spro_0710: Galactose-proton symport |
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Galactose-proton symport |
| CRON 2. | |||||||||||||
| dgoR |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -76 score = 4.03213 sequence = TGGTACTACAA Site: position = -119 score = 4.05878 sequence = TTGTACTACAT Site: position = -140 score = 5.48313 sequence = TTGTAGTACAA Gene: b4479: D-Galactonate repressor DgoR, GntR family |
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Salmonella typhimurium LT2 Site: position = -76 score = 4.03213 sequence = TAGTACTACAA Site: position = -140 score = 5.48313 sequence = TTGTAGTACAA Site: position = -119 score = 4.05878 sequence = TTGTACTACAT Gene: STM3830: D-Galactonate repressor DgoR, GntR family |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -76 score = 4.75763 sequence = TAGTAGTACAA Site: position = -119 score = 4.05878 sequence = TTGTACTACAT Site: position = -140 score = 5.48313 sequence = TTGTAGTACAA Gene: KPN_04098: D-Galactonate repressor DgoR, GntR family |
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Enterobacter sp. 638 Site: position = -76 score = 4.33761 sequence = TTGTACTGCAA Site: position = -119 score = 4.05878 sequence = TTGTACTACAT Site: position = -140 score = 5.48313 sequence = TTGTAGTACAA Gene: Ent638_0006: D-Galactonate repressor DgoR, GntR family |
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Serratia proteamaculans 568 Site: position = -68 score = 3.30663 sequence = AGGTACTACAA Site: position = -24 score = 3.91758 sequence = TTGTGCTGCAA Site: position = -89 score = 5.48313 sequence = TTGTAGTACAA Gene: Spro_0041: D-Galactonate repressor DgoR, GntR family |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -129 score = 4.03213 sequence = TGGTACTACAA Site: position = -150 score = 5.48313 sequence = TTGTAGTACAA Gene: ECA4419: D-Galactonate repressor DgoR, GntR family |
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D-Galactonate repressor DgoR, GntR family |
| dgoK |
Gene: b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
Gene: STM3829: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
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Gene: KPN_04097: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
Gene: Ent638_0007: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
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Gene: Spro_0042: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
Gene: ECA4418: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
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2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) |
| dgoA |
Gene: b4477: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
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Gene: KPN_04096: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
Gene: Ent638_0008: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
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Gene: Spro_0043: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
Gene: ECA4417: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
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2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) |
| dgoD |
Gene: b4478: Galactonate dehydratase (EC 4.2.1.6) |
Gene: STM3828: Galactonate dehydratase (EC 4.2.1.6) |
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Gene: KPN_04095: Galactonate dehydratase (EC 4.2.1.6) |
Gene: Ent638_0009: Galactonate dehydratase (EC 4.2.1.6) |
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Gene: Spro_0044: Galactonate dehydratase (EC 4.2.1.6) |
Gene: ECA4416: Galactonate dehydratase (EC 4.2.1.6) |
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Galactonate dehydratase (EC 4.2.1.6) |
| dgoT |
Gene: b3691: D-galactonate transport |
Gene: STM3827: D-galactonate transport |
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Gene: KPN_04094: D-galactonate transport |
Gene: Ent638_0010: D-galactonate transport |
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Gene: Spro_0045: D-galactonate transport |
Gene: ECA4415: D-galactonate transport |
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D-galactonate transport |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |