Regulog LmrA - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Multidrug resistance
Effector:	Quercetin; Fisetin; Catechin
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

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Member of regulog collections

By taxonomy - Bacillales
By TF family - TetR
By effector - Quercetin
By effector - Fisetin
By effector - Catechin
By pathway - Multidrug resistance

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	5	3
Bacillus amyloliquefaciens FZB42	2	1
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
yxaG	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 5.25078 sequence = TATAGAACGGTCTAGA Site: position = -33 score = 5.50344 sequence = TATAGACTGGTCTAAA Gene: BSU39980: Quercetin 2,3-dioxygenase	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0236: Quercetin 2,3-dioxygenase	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Quercetin 2,3-dioxygenase
qodI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39970: Putative transporter	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0756: Putative transporter	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative transporter

CRON 2.
lmrA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -51 score = 5.20281 sequence = AATAGACCAGTCACTA Gene: BSU02680: Transcriptional repressor of multidrug resistance regulon, TetR family	* Bacillus amyloliquefaciens FZB42 Site: position = -55 score = 5.20281 sequence = AATAGACCAGTCACTA Gene: RBAM_002990: Transcriptional repressor of multidrug resistance regulon, TetR family	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional repressor of multidrug resistance regulon, TetR family
lmrB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU02670: Lincomycin resistant protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002980: Lincomycin resistant protein	Bacillus pumilus SAFR-032 Gene: BPUM_0465: Lincomycin resistant protein	Bacillus licheniformis DSM 13 Gene: BLi01310: Lincomycin resistant protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Lincomycin resistant protein
qdoR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -40 score = 2.40751 sequence = TATATAAGTCGCTCTA Gene: BSU39990: Transcriptional regulator of multidrug resistance regulon, TetR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_032230: Transcriptional regulator of multidrug resistance regulon, TetR family	Bacillus pumilus SAFR-032 Gene: BPUM_0235: Transcriptional regulator of multidrug resistance regulon, TetR family	Bacillus licheniformis DSM 13 Gene: BLi01311: Transcriptional regulator of multidrug resistance regulon, TetR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of multidrug resistance regulon, TetR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog LmrA - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --