Regulog LmrA - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Multidrug resistance |
| Effector: | Quercetin; Fisetin; Catechin |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - TetR
- By effector - Quercetin
- By effector - Fisetin
- By effector - Catechin
- By pathway - Multidrug resistance
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 5 | 3 |
| Bacillus amyloliquefaciens FZB42 | 2 | 1 |
| Bacillus pumilus SAFR-032 | ||
| Bacillus licheniformis DSM 13 | ||
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| yxaG |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 5.25078 sequence = TATAGAACGGTCTAGA Site: position = -33 score = 5.50344 sequence = TATAGACTGGTCTAAA Gene: BSU39980: Quercetin 2,3-dioxygenase |
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Gene: BPUM_0236: Quercetin 2,3-dioxygenase |
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Quercetin 2,3-dioxygenase |
| qodI |
Gene: BSU39970: Putative transporter |
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Gene: BH0756: Putative transporter |
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Putative transporter |
| CRON 2. | ||||||||||||
| lmrA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -51 score = 5.20281 sequence = AATAGACCAGTCACTA Gene: BSU02680: Transcriptional repressor of multidrug resistance regulon, TetR family |
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Bacillus amyloliquefaciens FZB42 Site: position = -55 score = 5.20281 sequence = AATAGACCAGTCACTA Gene: RBAM_002990: Transcriptional repressor of multidrug resistance regulon, TetR family |
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Transcriptional repressor of multidrug resistance regulon, TetR family |
| lmrB |
Gene: BSU02670: Lincomycin resistant protein |
Gene: RBAM_002980: Lincomycin resistant protein |
Gene: BPUM_0465: Lincomycin resistant protein |
Gene: BLi01310: Lincomycin resistant protein |
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Lincomycin resistant protein |
| qdoR |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -40 score = 2.40751 sequence = TATATAAGTCGCTCTA Gene: BSU39990: Transcriptional regulator of multidrug resistance regulon, TetR family |
Gene: RBAM_032230: Transcriptional regulator of multidrug resistance regulon, TetR family |
Gene: BPUM_0235: Transcriptional regulator of multidrug resistance regulon, TetR family |
Gene: BLi01311: Transcriptional regulator of multidrug resistance regulon, TetR family |
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Transcriptional regulator of multidrug resistance regulon, TetR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |