Regulog YtlI - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	activator
Biological process:	L-cystine transporter
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - LysR
By pathway - L-cystine transporter

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	13	2
Bacillus amyloliquefaciens FZB42	10	2
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ytmI	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -129 score = 4.53774 sequence = ATTAAAATTACTGAA Site: position = -107 score = 5.76495 sequence = TTTACTTTTTTTGAT Gene: BSU29390: Putative N-acetyltransferase	* Bacillus amyloliquefaciens FZB42 Site: position = -129 score = 5.43693 sequence = ATTAATTTTCTTGAA Site: position = -107 score = 5.76495 sequence = TTTACTTTTTTTGAT Gene: RBAM_030850: Putative N-acetyltransferase	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5233: Putative N-acetyltransferase	Putative N-acetyltransferase
tcyJ	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29380: L-cystine ABC transporter binding lipoprotein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030840: L-cystine ABC transporter binding lipoprotein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	L-cystine ABC transporter binding lipoprotein
tcyK	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29370: L-cystine ABC transporter binding lipoprotein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030830: L-cystine ABC transporter binding lipoprotein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5232: L-cystine ABC transporter binding lipoprotein	L-cystine ABC transporter binding lipoprotein
tcyL	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29360: L-cystine ABC transporter (permease)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030820: L-cystine ABC transporter (permease)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5231: L-cystine ABC transporter (permease)	L-cystine ABC transporter (permease)
tcyM	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29350: L-cystine ABC transporter (permease)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030810: L-cystine ABC transporter (permease)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5230: L-cystine ABC transporter (permease)	L-cystine ABC transporter (permease)
tcyN	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29340: L-cystine ABC transporter (ATP-binding protein)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030800: L-cystine ABC transporter (ATP-binding protein)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5229: L-cystine ABC transporter (ATP-binding protein)	L-cystine ABC transporter (ATP-binding protein)
ytmO	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29330: Putative monooxygenase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030790: Putative monooxygenase	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5228: Putative monooxygenase	Putative monooxygenase
ytnI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29320: Putative redoxin	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030780: Putative redoxin	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative redoxin
ytnJ	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29310: Putative monooxygenase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030770: Putative monooxygenase	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5225: Putative monooxygenase	Putative monooxygenase
rbfK	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29300: RNA-binding riboflavin kinase	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	RNA-binding riboflavin kinase
ytnL	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29290: Putative aminohydrolase	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5227: Putative aminohydrolase	Putative aminohydrolase
ytnM	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29280: Hypothetical membrane protein	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi02823: Hypothetical membrane protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1638: Hypothetical membrane protein	Bacillus cereus ATCC 14579 Gene: BC3050: Hypothetical membrane protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical membrane protein

CRON 2.
ytlI	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -61 score = 1.64059 sequence = ATCAAAAAAAgTAAA Site: position = -39 score = 3.38715 sequence = TTCAGTAATTTTAAT Gene: BSU29400: Transcriptional regulator YtlI, LysR family	* Bacillus amyloliquefaciens FZB42 Site: position = -36 score = 1.64059 sequence = ATCAAAAAAAgTAAA Site: position = -14 score = 2.40081 sequence = tTCAAgAAAATTAAT Gene: RBAM_030860: Transcriptional regulator YtlI, LysR family	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator YtlI, LysR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog YtlI - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --