Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HexR regulog to Marinobacter algicola DG893

Reference regulog properties
Source regulog: HexR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Marinobacter algicola DG893
Orthologous TF(s) MDG893_00060
Regulated genes 2
Built upon 316 sites [see more]
Predicted regulatory interactions in Marinobacter algicola DG893
Locus tag Position Score Sequence
Position: -150
Score: 4.4
Sequence: TTGTTATCTAATTACTT
Locus tag: MDG893_00035
MDG893_00035 -150 4.4 TTGTTATCTAATTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapA2
Ortholog function: glyceraldehyde-3-phosphate dehydrogenase, type I
Shewanella oneidensis MR-1 SO_2345 -49 4.6 TGGTAATTTTACTACCA
Shewanella putrefaciens CN-32 Sputcn32_1889 -49 4.6 TGGTAATTTTACTACCA
Shewanella sp W3-18-1 Sputw3181_2119 -49 4.6 TGGTAATTTTACTACCA
Shewanella sp ANA-3 Shewana3_2124 -49 4.6 TGGTAATTTTACTACCA
Shewanella sp MR-4 Shewmr4_2023 -49 4.6 TGGTAATTTTACTACCA
Shewanella sp MR-7 Shewmr7_1952 -49 4.6 TGGTAATTTTACTACCA
Shewanella baltica OS155 Sbal_2218 -49 4.6 TGGTAATTTTACTACCA
Shewanella denitrificans OS217 Sden_1791 -63 4.4 TGGTAATTTTACAACTA
Shewanella frigidimarina NCIMB 400 Sfri_1940 -136 4.7 ATGTAAAAAAAATACAA
-62 4.2 TGGTAATTTTACAACCA
Shewanella amazonensis SB2B Sama_1808 -122 4.4 ATGTAAAAATATAACGA
-48 4.6 TGGTAATTTTACTACCA
Shewanella loihica PV-4 Shew_2002 -175 4.3 TAGTATTTTTTTTACAG
-50 4.6 TGGTAATTTTACTACCA
Shewanella pealeana ATCC 700345 Spea_2104 -126 4.6 ATGTAAAAAAATTACCT
-51 4.2 TGGTAATTTTACAACCA
Shewanella halifaxensis HAW-EB4 Shal_2076 -128 4.4 GTGTAAAAAAATTACCG
-53 4.6 TGGTAATTTTACTACCA
Shewanella piezotolerans WP3 swp_2533 -126 4.6 ATGTAAAAAAATTACCT
-51 4.6 TGGTAATTTTACTACCA
Shewanella sediminis HAW-EB3 Ssed_2228 -51 4.6 TGGTAATTTTACTACCA
Shewanella woodyi ATCC 51908 Swoo_2393 -51 4.6 TGGTAATTTTACTACCA