Propagation of SO1578 regulog to Shewanella loihica PV-4
| Source regulog: | SO1578 - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Glutathione metabolism |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella loihica PV-4 |
| Orthologous TF(s) | Shew_2729 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -66
Score: 6.1 Sequence: ATAACTGAACGTTCGGTCAA
Locus tag: Shew_2729
|
||||
| Shew_2729 | -66 | 6.1 | ATAACTGAACGTTCGGTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1578 | ||||
| Ortholog function: Transcriptional regulator, TetR family | ||||
| Shewanella oneidensis MR-1 | SO_1578 | -112 | 6.6 | TTAACGGAACGATCGGTTAG |
| Shewanella sp ANA-3 | Shewana3_2864 | -112 | 6.6 | TTAACGGAACGATCGGTTAG |
| Shewanella sp MR-4 | Shewmr4_2694 | -112 | 6.6 | TTAACGGAACGATCGGTTAG |
| Shewanella sp MR-7 | Shewmr7_2762 | -111 | 6.7 | TTAACGGAACGTTCGGTTAG |
| Shewanella baltica OS155 | Sbal_1395 | -157 | 6.6 | TTAACGGAACGATCGGTTAG |
| -122 | 5 | ATATCTAAACGATCAGTCAA | ||
| Shewanella amazonensis SB2B | Sama_1089 | -103 | 6.2 | TTATCTGAACGATCGGTTAG |
| -68 | 5.5 | ATAACTGAACGAACGGTCAA | ||
| Shewanella loihica PV-4 | Shew_2729 | -101 | 5.6 | TTAACTGAACGCTCGTTTAG |
| -66 | 6.1 | ATAACTGAACGTTCGGTCAA | ||
| Shewanella woodyi ATCC 51908 | Swoo_3433 | -90 | 6.6 | TTAACTGAACGATCGGTTAG |
| -55 | 5 | ATAGCTAAACGTTCGGTCAA | ||
|
Position: -114
Score: 6.1 Sequence: TTGACCGAACGTTCAGTTAT
Locus tag: Shew_2730
|
||||
| Shew_2730 | -114 | 6.1 | TTGACCGAACGTTCAGTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1577 | ||||
| Ortholog function: Glutathione S-transferase (EC 2.5.1.18) | ||||
| Shewanella oneidensis MR-1 | SO_1577 | -63 | 6.6 | CTAACCGATCGTTCCGTTAA |
| Shewanella sp ANA-3 | Shewana3_2865 | -63 | 6.6 | CTAACCGATCGTTCCGTTAA |
| Shewanella sp MR-4 | Shewmr4_2695 | -63 | 6.6 | CTAACCGATCGTTCCGTTAA |
| Shewanella sp MR-7 | Shewmr7_2763 | -63 | 6.7 | CTAACCGAACGTTCCGTTAA |
| Shewanella baltica OS155 | Sbal_1394 | -110 | 5 | TTGACTGATCGTTTAGATAT |
| -75 | 6.6 | CTAACCGATCGTTCCGTTAA | ||
| Shewanella amazonensis SB2B | Sama_1088 | -66 | 5.5 | TTGACCGTTCGTTCAGTTAT |
| -31 | 6.2 | CTAACCGATCGTTCAGATAA | ||
| Shewanella loihica PV-4 | Shew_2730 | -114 | 6.1 | TTGACCGAACGTTCAGTTAT |
| -79 | 5.6 | CTAAACGAGCGTTCAGTTAA | ||
| Shewanella woodyi ATCC 51908 | Swoo_3434 | -97 | 5 | TTGACCGAACGTTTAGCTAT |
| -62 | 6.6 | CTAACCGATCGTTCAGTTAA | ||