Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraR regulog to Geobacillus thermodenitrificans NG80-2

Reference regulog properties
Source regulog: AraR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus thermodenitrificans NG80-2
Orthologous TF(s) GTNG_1798
Regulated genes 4
Built upon 43 sites [see more]
Predicted regulatory interactions in Geobacillus thermodenitrificans NG80-2
Locus tag Position Score Sequence
Position: -236
Score: 5.5
Sequence: AAAGTTATACGTACAAAAAA
Locus tag: GTNG_1794
GTNG_1794 -236 5.5 AAAGTTATACGTACAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araN
Ortholog function: Alpha-arabinosides ABC transport system, substrate-binding protein
Bacillus subtilis subsp. subtilis str. 168 BSU28750 -103 5.9 AAAATTGTTCGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_025810 -99 5.8 AAAATTGTTCGTACAAATAA
-57 5.3 ATATTCGTACGTATATTTTT
Bacillus licheniformis DSM 13 BLi03024 -155 5.2 GAAGTTGTTCGTACAAATAT
-125 5.7 TTAGTTGTACGTACATATAA
Bacillus halodurans C-125 BH0905 -49 4.4 AAACGTGTACGTACACGATA
Position: -59
Score: 6
Sequence: AAAATTGTACGTACAAAATT
Locus tag: GTNG_1797
GTNG_1797 -59 6 AAAATTGTACGTACAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araD
Ortholog function: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Bacillus subtilis subsp. subtilis str. 168 BSU28780 -103 5.9 AAAATTGTTCGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_025840 -99 5.8 AAAATTGTTCGTACAAATAA
-57 5.3 ATATTCGTACGTATATTTTT
Bacillus licheniformis DSM 13 BLi03026 -155 5.2 GAAGTTGTTCGTACAAATAT
-125 5.7 TTAGTTGTACGTACATATAA
Anoxybacillus flavithermus WK1 Aflv_0529 -54 5.7 AAAAATGTACGTACAAAATT
Geobacillus kaustophilus HTA426 GK1906 -61 5.6 AAAATTGTACGTACAATAGT
Bacillus halodurans C-125 BH1871 -71 5.7 AAAATTGTACGTACAAGTGT
Paenibacillus sp. JDR-2 Pjdr2_4207 -62 5.3 AAACATGTACGTACAAGTGT
Position: -74
Score: 5
Sequence: AAATAGATACGAACAAATGA
Locus tag: GTNG_1798
GTNG_1798 -74 5 AAATAGATACGAACAAATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU33970 -91 5.5 TCAATTGTACGTACTTATAT
-48 6 TAATTAGTACGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_031330 -167 5.6 ACATTTGTACGTACTTATGA
-124 5.4 AAATTAGTACGCACAAATAA
Bacillus pumilus SAFR-032 BPUM_2330 -191 6.1 ATATTTGTACGTACATATGT
Bacillus licheniformis DSM 13 BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Anoxybacillus flavithermus WK1 Aflv_0528 -81 5.9 AAATATATACGTACAAATAA
Geobacillus kaustophilus HTA426 GK1907 -75 5 ATAATGATACGGACAAATAA
Bacillus halodurans C-125 BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Oceanobacillus iheyensis HTE831 OB2800 -203 5.4 ATTATTGTACGTACATTTGT
-170 5.9 ATATATATACGTACAAATTA
-63 5.3 AAATATGTACATACAAGTAT
Paenibacillus sp. JDR-2 Pjdr2_4208 -100 4.8 TCACATGTACATACAAGTTA
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