Propagation of CueR regulog to Shewanella piezotolerans WP3
| Source regulog: | CueR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Copper resistance |
| Effector: | Copper ion, (Cu+) |
| Phylum: | Proteobacteria/Gamma |
| Propagated regulon: | |
| Target genome | Shewanella piezotolerans WP3 |
| Orthologous TF(s) | swp_3378 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -73
Score: 6 Sequence: ACTCTCCCCTTATGGGAGACA
Locus tag: swp_3377
|
||||
| swp_3377 | -73 | 6 | ACTCTCCCCTTATGGGAGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: copA | ||||
| Ortholog function: Copper-translocating P-type ATPase (EC 3.6.3.4) | ||||
| Shewanella oneidensis MR-1 | SO_1689 | -65 | 6.5 | ACTCTCCCGTGATGGGAGACT |
| Shewanella putrefaciens CN-32 | Sputcn32_1408 | -65 | 6.5 | ACTCTCCCGTGATGGGAGACT |
| Shewanella sp W3-18-1 | Sputw3181_2693 | -65 | 6.5 | ACTCTCCCGTGATGGGAGACT |
| Shewanella sp ANA-3 | Shewana3_2761 | -65 | 6.5 | ACTCTCCCGTGATGGGAGACT |
| Shewanella sp MR-4 | Shewmr4_2587 | -65 | 6.5 | ACTCTCCCGTGATGGGAGACT |
| Shewanella sp MR-7 | Shewmr7_2654 | -65 | 6.5 | ACTCTCCCGTGATGGGAGACT |
| Shewanella baltica OS155 | Sbal_1505 | -65 | 6.2 | ACTCTCCCGCAATGGGAGACT |
| Shewanella pealeana ATCC 700345 | Spea_2772 | -63 | 5.1 | ACTCTCCCCCTGTAGGAGACA |
| Shewanella halifaxensis HAW-EB4 | Shal_2867 | -62 | 6 | ACTCTCCCCTTATGGGAGACA |
| Shewanella piezotolerans WP3 | swp_3377 | -73 | 6 | ACTCTCCCCTTATGGGAGACA |
| Shewanella sediminis HAW-EB3 | Ssed_1485 | -80 | 6 | ACTCTCCCATTAGGGGAGACA |
| Shewanella woodyi ATCC 51908 | Swoo_3191 | -81 | 5.8 | ACCCTCCCATAAGGGGAGACA |
|
Position: -58
Score: 6 Sequence: TGTCTCCCATAAGGGGAGAGT
Locus tag: swp_3378
|
||||
| swp_3378 | -58 | 6 | TGTCTCCCATAAGGGGAGAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cueR | ||||
| Ortholog function: Copper-responsive transcriptional regulator, MerR family | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_1407 | -86 | 6.5 | AGTCTCCCATCACGGGAGAGT |
| Shewanella sp W3-18-1 | Sputw3181_2694 | -86 | 6.5 | AGTCTCCCATCACGGGAGAGT |
| Shewanella sp ANA-3 | Shewana3_2762 | -92 | 6.5 | AGTCTCCCATCACGGGAGAGT |
| Shewanella sp MR-4 | Shewmr4_2588 | -104 | 6.5 | AGTCTCCCATCACGGGAGAGT |
| Shewanella sp MR-7 | Shewmr7_2655 | -104 | 6.5 | AGTCTCCCATCACGGGAGAGT |
| Shewanella baltica OS155 | Sbal_1504 | -105 | 6.2 | AGTCTCCCATTGCGGGAGAGT |
| Shewanella pealeana ATCC 700345 | Spea_2773 | -57 | 5.1 | TGTCTCCTACAGGGGGAGAGT |
| Shewanella halifaxensis HAW-EB4 | Shal_2868 | -81 | 6 | TGTCTCCCATAAGGGGAGAGT |
| Shewanella piezotolerans WP3 | swp_3378 | -58 | 6 | TGTCTCCCATAAGGGGAGAGT |
| Shewanella sediminis HAW-EB3 | Ssed_1484 | -81 | 6 | TGTCTCCCCTAATGGGAGAGT |
| Shewanella woodyi ATCC 51908 | Swoo_3192 | -60 | 5.8 | TGTCTCCCCTTATGGGAGGGT |