Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BglR regulog to Shewanella piezotolerans WP3

Reference regulog properties
Source regulog: BglR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Beta-glucosides utilization
Effector: Beta-glucoside
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella piezotolerans WP3
Orthologous TF(s) swp_1632
Regulated genes 3
Built upon 24 sites [see more]
Predicted regulatory interactions in Shewanella piezotolerans WP3
Locus tag Position Score Sequence
Position: -63
Score: 6.3
Sequence: TTTGTAAGCGCTTACATT
Locus tag: swp_1631
swp_1631 -63 6.3 TTTGTAAGCGCTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp(Bgl)
Ortholog function: Predicted beta-glucoside specific TonB-dependent outer membrane receptor
Shewanella frigidimarina NCIMB 400 Sfri_1313 -304 6.3 AAAGAAAGCGCTTACATT
-143 6.8 TATGTAAGCGCTTACATT
Shewanella piezotolerans WP3 swp_1631 -108 5.5 TGTGTAAGCGCTTACAAA
-63 6.3 TTTGTAAGCGCTTACATT
Shewanella woodyi ATCC 51908 Swoo_1144 -109 6.5 AATGTAAGCGCTTACAAT
Position: -252
Score: 6.9
Sequence: AATGAAAGCGCTTACATT
Position: -191
Score: 6.9
Sequence: AATGAAAGCGCTTACATT
Locus tag: swp_1636
swp_1636 -252 6.9 AATGAAAGCGCTTACATT
-191 6.9 AATGAAAGCGCTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcP
Ortholog function: Predicted glucose transporter in beta-glucoside utilization gene cluster
Shewanella amazonensis SB2B Sama_1403 -111 6.9 AATGAAAGCGCTTACATT
Shewanella piezotolerans WP3 swp_1636 -252 6.9 AATGAAAGCGCTTACATT
-191 6.9 AATGAAAGCGCTTACATT
Position: -100
Score: 6.5
Sequence: AATGTAAGCGGTTACATT
Locus tag: swp_4298
swp_4298 -100 6.5 AATGTAAGCGGTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglT2
Ortholog function: Sugar:cation symporter family protein
Shewanella piezotolerans WP3 swp_4298 -100 6.5 AATGTAAGCGGTTACATT