Propagation of TyrR regulog to Idiomarina baltica OS145

Reference regulog properties
Source regulog:	TyrR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	TyrR
Regulation mode:	activator
Biological process:	Amino acid utilization
Effector:	Tyrosine; Phenylalanine
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Idiomarina baltica OS145
Orthologous TF(s)	No orthologous TFs found
Regulated genes	6

Built upon 312 sites [see more]

Predicted regulatory interactions in *Idiomarina baltica OS145*
	Locus tag	Position	Score	Sequence
Position: -100 Score: 4.2 Sequence: ATGTCAAATAAACTTGACTT Position: -60 Score: 4.1 Sequence: TGGTAAAGTGTATTTTACAT Locus tag: OS145_00540
	OS145_00540	-100	4.2	ATGTCAAATAAACTTGACTT
		-60	4.1	TGGTAAAGTGTATTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_3409
Ortholog function: hypothetical protein
Shewanella frigidimarina NCIMB 400	Sfri_3409	-99	4.7	AAGTAAAGCTTACTTGACAC
		-55	4.3	AAGTCAAGCTTAGTTGACAT
Shewanella loihica PV-4	Shew_3626	-90	4.4	ATGTAAAGCATGCTTGACCT
		-45	4.1	ATGTAAAGGGTGTTTGACAT
Shewanella pealeana ATCC 700345	Spea_0139	-106	3.9	AAGTAAAGCAAGCTTGACTT
		-62	4.2	AAGTCAAGCGTGCTTTACAT
Shewanella halifaxensis HAW-EB4	Shal_4179	-105	3.9	AAGTAAAGCATGCTTGACTT
		-61	4.5	AAGTCAAGCTTACTTTACAT
Shewanella piezotolerans WP3	swp_0181	-47	4.4	AAGTAAAGCTCACTTTACAA
Shewanella sediminis HAW-EB3	Ssed_4363	-111	3.9	AAGTAAAGCAAGCTTGACTT

Position: -140 Score: 4.6 Sequence: GTGGAAAAATAGCGTTACAG Locus tag: OS145_07157
	OS145_07157	-140	4.6	GTGGAAAAATAGCGTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mdeA
Ortholog function: Methionine gamma-lyase (EC 4.4.1.11)
Shewanella oneidensis MR-1	SO_1812	-197	3.9	ATGTAACAACTTAGTTACAG
Shewanella putrefaciens CN-32	Sputcn32_1507	-210	4.1	ATGTAACAAGTTAATTACAC
Shewanella sp W3-18-1	Sputw3181_2594	-210	4.1	ATGTAACAAGTTAATTACAC
Shewanella sp ANA-3	Shewana3_2643	-208	3.9	ATGTAACAACTTAGTTACAG
Shewanella sp MR-4	Shewmr4_2477	-208	3.9	ATGTAACAACTTAGTTACAG
Shewanella sp MR-7	Shewmr7_2545	-208	3.9	ATGTAACAACTTAGTTACAG
Shewanella baltica OS155	Sbal_1622	-199	4.1	ATGTAACAAGTTAATTACAC
Shewanella denitrificans OS217	Sden_2521	-152	4.3	ATGTAACATAGTTTTTACAT
Shewanella frigidimarina NCIMB 400	Sfri_1369	-148	4.7	TTGTAAAATTGTTTTTACAT
Shewanella pealeana ATCC 700345	Spea_2664	-215	4	ACGTAACAATCACTTTACAA
Shewanella halifaxensis HAW-EB4	Shal_2751	-214	4.4	TTGTAACATTCAGTTTACAA
Shewanella piezotolerans WP3	swp_3243	-242	4.1	ACGTAACATATATTTTACAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of TyrR regulog to Idiomarina baltica OS145

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --