Propagation of Fnr regulog to Alteromonas macleodii 'Deep ecotype'

Reference regulog properties
Source regulog:	Fnr - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:
Biological process:	Anaerobic metabolism
Effector:	Oxygen
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Alteromonas macleodii 'Deep ecotype'
Orthologous TF(s)	MADE_02063
Regulated genes	4

Built upon 541 sites [see more]

Predicted regulatory interactions in *Alteromonas macleodii 'Deep ecotype'*
	Locus tag	Position	Score	Sequence
Position: -127 Score: 5.1 Sequence: TTGATCTATATCAA Position: -76 Score: 4.8 Sequence: TTGCGCTGGATCAA Locus tag: MADE_00029
	MADE_00029	-127	5.1	TTGATCTATATCAA
		-76	4.8	TTGCGCTGGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Shewanella amazonensis SB2B	Sama_1371	-105	5.2	TTGATTTGGATCAA
Shewanella baltica OS155	Sbal_1490	-103	5.2	TTGATTTGGATCAA
Shewanella denitrificans OS217	Sden_2589	-153	4.5	GTGAATTAGATCAA
		-103	5.3	TTGATCCAGATCAA
Shewanella frigidimarina NCIMB 400	Sfri_1334	-166	4.6	GTGATCCAAATCAA
		-105	5.3	TTGATCTAAATCAA
Shewanella halifaxensis HAW-EB4	Shal_2887	-107	4.4	TTGATTCAGGTCAA
Shewanella oneidensis MR-1	SO1673	-293	4.3	TTGATGTAAATGAA
		-106	5.2	TTGATTTGGATCAA
Shewanella pealeana ATCC 700345	Spea_2787	-155	4.3	GTGATCTAGATCCT
		-104	5.3	TTGATTTAGATCAA
Shewanella piezotolerans WP3	swp_3395	-107	5.6	TTGATCTAGATCAA
Shewanella putrefaciens CN-32	Sputcn32_1392	-103	5.3	TTGATTTAGATCAA
Shewanella sediminis HAW-EB3	Ssed_1469	-154	3.8	GTGAGCTTGGTCAT
		-104	5.6	TTGATCTGGATCAA
Shewanella sp ANA-3	Shewana3_2775	-103	5.2	TTGATTTGGATCAA
Shewanella sp MR-4	Shewmr4_2601	-103	5.2	TTGATTTGGATCAA
Shewanella sp MR-7	Shewmr7_2668	-103	5.2	TTGATTTGGATCAA
Shewanella sp W3-18-1	Sputw3181_2709	-103	5.3	TTGATTTAGATCAA
Shewanella woodyi ATCC 51908	Swoo_3207	-154	4.1	GTGAGTTCGATCAA
		-104	5.2	TTGATTTGGATCAA

Position: -110 Score: 4.6 Sequence: TTGATCTAAAACAA Locus tag: MADE_02064
	MADE_02064	-110	4.6	TTGATCTAAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uspE
Ortholog function: Universal stress protein E
Shewanella amazonensis SB2B	Sama_1800	-74	4.6	TTGATCTAAAACAA
Shewanella baltica OS155	Sbal_2210	-72	4.9	TTGATCTAGAACAA
Shewanella baltica OS155	Sbal_4496	-72	4.9	TTGATCTAGAACAA
Shewanella denitrificans OS217	Sden_1842	-69	4.2	TTGATATAGCTCAC
Shewanella frigidimarina NCIMB 400	Sfri_2019	-87	4.6	ATGATCTATCTCAA
Shewanella halifaxensis HAW-EB4	Shal_2206	-73	4.6	TTGATCTAAAACAA
Shewanella loihica PV-4	Shew_1994	-72	4.6	TTGATCTAAAACAA
Shewanella oneidensis MR-1	SO2355	-72	4.9	TTGATCTAGAACAA
Shewanella pealeana ATCC 700345	Spea_2223	-74	4.6	TTGATCTAAAACAA
Shewanella piezotolerans WP3	swp_2581	-71	4.6	TTGATCTAAAACAA
Shewanella putrefaciens CN-32	Sputcn32_1950	-72	4.9	TTGATCTAGAACAA
Shewanella sediminis HAW-EB3	Ssed_2220	-71	4.6	TTGATCTGAAACAA
Shewanella sp ANA-3	Shewana3_2116	-72	4.9	TTGATCTAGAACAA
Shewanella sp MR-4	Shewmr4_2015	-72	4.9	TTGATCTAGAACAA
Shewanella sp MR-7	Shewmr7_1960	-72	4.9	TTGATCTAGAACAA
Shewanella sp W3-18-1	Sputw3181_2055	-72	4.9	TTGATCTAGAACAA
Shewanella woodyi ATCC 51908	Swoo_2416	-70	4.9	TTGATCTAAAGCAA

Position: 36 Score: 3.9 Sequence: TTTATGTCGCTCAA Locus tag: MADE_02199
	MADE_02199	36	3.9	TTTATGTCGCTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: moaA
Ortholog function: Molybdenum cofactor biosynthesis protein MoaA
Shewanella amazonensis SB2B	Sama_3524	-145	4.6	ATGATCCAGACCAA
Shewanella baltica OS155	Sbal_0284	-152	3.9	GTGATCTAGGTTAA
Shewanella loihica PV-4	Shew_0087	-154	4.2	TTGATCTTAAACAA
Shewanella oneidensis MR-1	SO4452	-185	4.5	TTGAACCTGATCAA
Shewanella putrefaciens CN-32	Sputcn32_0389	-152	4.5	TTGATCTAGGCCAA
Shewanella sediminis HAW-EB3	Ssed_4402	-186	4.9	TTGATCTTGAGCAA
Shewanella sp ANA-3	Shewana3_0274	-152	4.7	TTGAAGCGGATCAA
Shewanella sp MR-4	Shewmr4_0273	-152	4.7	TTGAAGCGGATCAA
Shewanella sp MR-7	Shewmr7_3748	-152	4.7	TTGAAGCGGATCAA
Shewanella sp W3-18-1	Sputw3181_0243	-152	4.5	TTGATCTAGGCCAA
Shewanella woodyi ATCC 51908	Swoo_4793	-187	4.6	TTGATCCTGAGCAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Alteromonas macleodii 'Deep ecotype'

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --