Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Alteromonas macleodii 'Deep ecotype'

Reference regulog properties
Source regulog: FadR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonas macleodii 'Deep ecotype'
Orthologous TF(s) MADE_01148
Regulated genes 1
Built upon 101 sites [see more]
Predicted regulatory interactions in Alteromonas macleodii 'Deep ecotype'
Locus tag Position Score Sequence
Position: -65
Score: 4.7
Sequence: TACAGGTCAGACCACTT
Locus tag: MADE_02701
MADE_02701 -65 4.7 TACAGGTCAGACCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadI
Ortholog function: FadI component of anaerobic fatty acid oxidation complex
Shewanella oneidensis MR-1 SO_3089 -109 5.2 TAATGGTCAGACCTGTT
Shewanella putrefaciens CN-32 Sputcn32_2460 -114 5.2 TAATGGTCAGACCTGTT
Shewanella sp W3-18-1 Sputw3181_1548 -114 5.2 TAATGGTCAGACCTGTT
Shewanella sp ANA-3 Shewana3_1460 -113 5.2 TAATGGTCAGACCTGTT
Shewanella sp MR-4 Shewmr4_1407 -113 5.2 TAATGGTCAGACCTGTT
Shewanella sp MR-7 Shewmr7_1472 -113 5.2 TAATGGTCAGACCTGTT
Shewanella baltica OS155 Sbal_2761 -114 5.2 TAATGGTCAGACCTGTT
Shewanella denitrificans OS217 Sden_1529 -88 4.7 TGATGGTCAGACCAGAA
Shewanella frigidimarina NCIMB 400 Sfri_2677 -82 4.9 TGATGGTCTGACCAGAT
Shewanella amazonensis SB2B Sama_2168 -89 5.2 TAATGGTCAGACCTGTT
Shewanella loihica PV-4 Shew_2426 -112 4.9 TGATGGTCTGACCTGTT
Shewanella pealeana ATCC 700345 Spea_2599 -94 4.9 TAATGGTCAGACCTGTC
Shewanella halifaxensis HAW-EB4 Shal_2671 -97 5.2 TAATGGTCAGACCTGTT
Shewanella piezotolerans WP3 swp_3140 -100 5.2 TAATGGTCAGACCTGTT
Shewanella sediminis HAW-EB3 Ssed_1628 -129 4.9 TGATGGTCAGACCTGTT
Shewanella woodyi ATCC 51908 Swoo_3027 -116 5.2 TAATGGTCAGACCTGTT