Propagation of Fur regulog to Glaciecola sp. HTCC2999
Source regulog: | Fur - Shewanellaceae |
Regulator type: | Transcription factor |
Regulator family: | FUR |
Regulation mode: | repressor (activator) |
Biological process: | Iron homeostasis |
Effector: | Iron ion, (Fe2+) |
Phylum: | Proteobacteria |
Propagated regulon: | |
Target genome | Glaciecola sp. HTCC2999 |
Orthologous TF(s) | GHTCC_010100006492 |
Regulated genes | 3 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -85
Score: 5.9 Sequence: AATTGAGATTGATTCTCATTT
Locus tag: GHTCC_010100005799
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GHTCC_010100005799 | -85 | 5.9 | AATTGAGATTGATTCTCATTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: Sama_0590 | ||||
Ortholog function: TonB-dependent receptor | ||||
Shewanella sp MR-4 | Shewmr4_0630 | -62 | 5 | TAACGAGAATAATTCTTGTTT |
Shewanella sp MR-7 | Shewmr7_3399 | -62 | 5 | TAACGAGAATAATTCTTGTTT |
Shewanella amazonensis SB2B | Sama_0590 | -2 | 5.9 | AAATGATAACTATTGTCATTA |
Shewanella pealeana ATCC 700345 | Spea_0713 | -66 | 5.5 | AAATGATAATCAATCCCATTA |
Shewanella halifaxensis HAW-EB4 | Shal_0766 | -67 | 5.6 | AAATGAGAATGAATAGCATTA |
Shewanella sediminis HAW-EB3 | Ssed_3888 | -84 | 5.5 | AAATGATAACCACTCTCATTA |
Shewanella woodyi ATCC 51908 | Swoo_3787 | -2 | 5.5 | AAATGATAATCAATCCCATTA |
Position: -70
Score: 4.4 Sequence: TTATTATAAAAATTTTCAAAT
Locus tag: GHTCC_010100006129
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GHTCC_010100006129 | -70 | 4.4 | TTATTATAAAAATTTTCAAAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: bfr2 | ||||
Ortholog function: Bacterioferritin subunit 2 | ||||
Shewanella oneidensis MR-1 | SO1111 | -125 | 5.2 | TAATGAGAATGCTTTTAATTA |
Shewanella putrefaciens CN-32 | Sputcn32_0948 | -126 | 5.5 | AAATGAGAATGGTTTTTATAA |
Shewanella sp W3-18-1 | Sputw3181_3228 | -126 | 5.5 | AAATGAGAATGGTTTTTATAA |
Shewanella sp ANA-3 | Shewana3_0946 | -125 | 5.4 | TAATGAGAATGCTTTTTATCT |
Shewanella sp MR-4 | Shewmr4_0944 | -124 | 5.4 | TAATGAGAATGCTTTTTATCT |
Shewanella sp MR-7 | Shewmr7_0982 | -125 | 5.4 | TAATGAGAATGCTTTTTATCT |
Shewanella baltica OS155 | Sbal_0932 | -126 | 5.3 | AAATGAGAATGGTTGTTATCA |
Shewanella denitrificans OS217 | Sden_0990 | -120 | 5.6 | TAATGATAATGGTTATCACTA |
Shewanella frigidimarina NCIMB 400 | Sfri_0957 | -121 | 6 | TAATGATAATAGTTATCAATT |
Shewanella amazonensis SB2B | Sama_2530 | -122 | 4.7 | CAATAAGAATAATTAGCCTTT |
Shewanella loihica PV-4 | Shew_2873 | -115 | 4.8 | GAATGAGAACGATTTTCTTTG |
Shewanella pealeana ATCC 700345 | Spea_3095 | -116 | 5.4 | TAATGAGAATGGTTATCTTTA |
Shewanella halifaxensis HAW-EB4 | Shal_3179 | -121 | 4.3 | TAGTGATAATGAAAATCACTA |
-88 | 4.3 | TGTTGATATTTAACCTTATTT | ||
Shewanella piezotolerans WP3 | swp_1175 | -118 | 5.5 | TAATGATAATAATTATCTTTA |
Shewanella sediminis HAW-EB3 | Ssed_2230 | -137 | 4.6 | TAATGGGAATGATTATCTCTA |
Shewanella woodyi ATCC 51908 | Swoo_3608 | -167 | 4.5 | AAATGATAATGCTTAATGTTA |
Position: -46
Score: 5.9 Sequence: AAATGAGAACTATTATTATTA
Locus tag: GHTCC_010100007522
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GHTCC_010100007522 | -46 | 5.9 | AAATGAGAACTATTATTATTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: bfd | ||||
Ortholog function: Bacterioferritin-associated ferredoxin | ||||
Shewanella oneidensis MR-1 | SO0583 | -55 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella putrefaciens CN-32 | Sputcn32_3295 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella sp W3-18-1 | Sputw3181_0646 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella sp ANA-3 | Shewana3_0581 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella sp MR-4 | Shewmr4_0582 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella sp MR-7 | Shewmr7_3448 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella baltica OS155 | Sbal_0542 | -53 | 5.3 | ATTTGATAAGCGTTTTCATTT |
Shewanella denitrificans OS217 | Sden_3217 | -99 | 5.7 | CAATGATAACCGTTTTCATTT |
Shewanella frigidimarina NCIMB 400 | Sfri_3324 | -76 | 5.7 | CAATGATAACCGTTTTCATTT |
Shewanella amazonensis SB2B | Sama_3040 | -59 | 5.5 | TGATGAGAACGGTTTTTATTT |
Shewanella pealeana ATCC 700345 | Spea_3555 | -58 | 5.8 | CATTGAGAATCATTTTCATTT |
Shewanella halifaxensis HAW-EB4 | Shal_3649 | -58 | 5.5 | CACTGAGAATCATTTTCATTT |
Shewanella piezotolerans WP3 | swp_0771 | -86 | 5.3 | GATTGATAACTATTCTCATCA |
-57 | 5.6 | CATTGAGAATCGTTTTCATTT | ||