Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HexR regulog to Glaciecola sp. HTCC2999

Reference regulog properties
Source regulog: HexR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Glaciecola sp. HTCC2999
Orthologous TF(s) GHTCC_010100004730
Regulated genes 4
Built upon 316 sites [see more]
Predicted regulatory interactions in Glaciecola sp. HTCC2999
Locus tag Position Score Sequence
Position: -173
Score: 5.5
Sequence: TTGTAGTAAAATTACAA
Locus tag: GHTCC_010100004730
GHTCC_010100004730 -173 5.5 TTGTAGTAAAATTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hexR
Ortholog function: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Shewanella oneidensis MR-1 SO_2490 -249 5 TTGTAATATAACAACAG
Shewanella putrefaciens CN-32 Sputcn32_1865 -252 4.8 TTGTTGTAATATAACAA
-249 5 TTGTAATATAACAACAG
Shewanella sp W3-18-1 Sputw3181_2143 -249 5 TTGTAATATAACAACAG
Shewanella sp ANA-3 Shewana3_2152 -250 5 TTGTAATATAACAACAG
Shewanella sp MR-4 Shewmr4_2047 -250 5 TTGTAATATAACAACAG
Shewanella sp MR-7 Shewmr7_1928 -250 5 TTGTAATATAACAACAG
Shewanella baltica OS155 Sbal_2242 -250 5 TTGTAATATAACAACAG
Shewanella denitrificans OS217 Sden_2080 -249 5 TTGTAATATAACAACAG
Shewanella frigidimarina NCIMB 400 Sfri_1891 -266 5 TTGTAATATAACAACAG
-122 4.5 TTGAAAAATAACTACAG
-54 4.6 ATGATATAAAATTACAT
Shewanella amazonensis SB2B Sama_1813 -251 5 TTGTAATATAACAACAG
Shewanella loihica PV-4 Shew_2049 -249 5 TTGTAATATAACAACAG
-151 4.8 TTGTGATTAAATTACTA
Shewanella pealeana ATCC 700345 Spea_2336 -254 5 TTGTAATATAACAACAG
-157 4.3 TCGTGATAAAATTACTA
-40 4.5 ATATAATAAAACTACAT
Shewanella halifaxensis HAW-EB4 Shal_1948 -252 5 TTGTAATATAACAACAG
-155 4.8 TTGTGATAAAATTACTA
Shewanella piezotolerans WP3 swp_2389 -252 5 TTGTAATATAACAACAG
-155 4.3 TCGTGATAAAATTACTA
-40 4.5 ATATAATAAAACTACAT
Shewanella sediminis HAW-EB3 Ssed_2069 -248 5 TTGTAATATAACAACAG
-150 4.3 TCGTGATTAAATTACTA
Shewanella woodyi ATCC 51908 Swoo_2540 -248 5 TTGTAATATAACAACAG
-150 4.8 TTGTGATTAAATTACTA
Position: -98
Score: 5.5
Sequence: TTGTAATTTTACTACAA
Locus tag: GHTCC_010100004735
GHTCC_010100004735 -98 5.5 TTGTAATTTTACTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zwf
Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Shewanella oneidensis MR-1 SO_2489 -78 5 CTGTTGTTATATTACAA
Shewanella putrefaciens CN-32 Sputcn32_1866 -78 5 CTGTTGTTATATTACAA
Shewanella sp W3-18-1 Sputw3181_2142 -78 5 CTGTTGTTATATTACAA
Shewanella sp ANA-3 Shewana3_2151 -79 5 CTGTTGTTATATTACAA
Shewanella sp MR-4 Shewmr4_2046 -79 5 CTGTTGTTATATTACAA
Shewanella sp MR-7 Shewmr7_1929 -79 5 CTGTTGTTATATTACAA
Shewanella baltica OS155 Sbal_2241 -79 5 CTGTTGTTATATTACAA
Shewanella denitrificans OS217 Sden_2079 -260 4.2 TAGTTGTTTTATTACCT
-88 5 CTGTTGTTATATTACAA
Shewanella frigidimarina NCIMB 400 Sfri_1892 -232 4.5 CTGTAGTTATTTTTCAA
-88 5 CTGTTGTTATATTACAA
Shewanella amazonensis SB2B Sama_1812 -78 5 CTGTTGTTATATTACAA
Shewanella loihica PV-4 Shew_2048 -174 4.8 TAGTAATTTAATCACAA
-76 5 CTGTTGTTATATTACAA
Shewanella pealeana ATCC 700345 Spea_2335 -54 5 CTGTTGTTATATTACAA
Shewanella halifaxensis HAW-EB4 Shal_1949 -175 4.8 TAGTAATTTTATCACAA
-78 5 CTGTTGTTATATTACAA
Shewanella piezotolerans WP3 swp_2390 -175 4.3 TAGTAATTTTATCACGA
-78 5 CTGTTGTTATATTACAA
Shewanella sediminis HAW-EB3 Ssed_2070 -176 4.3 TAGTAATTTAATCACGA
-78 5 CTGTTGTTATATTACAA
Shewanella woodyi ATCC 51908 Swoo_2539 -175 4.8 TAGTAATTTAATCACAA
-77 5 CTGTTGTTATATTACAA
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